SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P15105	Glul	ACLYAGVK	MockWholeBrain	—	98.1	MRM	['Cys']
Q99JY9	Actr3	LGYAGNTEPQFIIPSCIAIK	Cerebellum	—	98.1	MRM	['Cys']
Q642K0	Myl6	CDFTEDQTAEFK	BrainStem	—	98.1	MRM	['Cys']
Q8R0Y6	Aldh1l1	TAACLAAGNTVVIKPAQVTPLTALK	BrainStem	—	98.1	MRM	['Cys']
Q99JP6	Homer3	AIINSTVTPNMTFTK	Cerebrum	—	98.1	MRM	['Meth']
Q9QUM9	Psma6	CDPAGYYCGFK	BrainStem	—	98.1	MRM	['Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	BrainStem	—	98.1	MRM	['Meth', 'Cys']
Q5EBQ0	Vdac3	CNTPTYCDLGK	BrainStem	—	98.0	MRM	['Cys']
P15105	Glul	TCLLNETGDEPFQYK	BrainStem	—	98.0	MRM	['Cys']
Q8K3J1	Ndufs8	YDIDMTK	BrainStem	—	98.0	MRM	['Meth']
Q9Z0N1	Eif2s3x	SCGSSTPDEFPTDIPGTK	BrainStem	—	98.0	MRM	['Cys']
P58252	Eef2	DLEEDHACIPIK	Cerebellum	—	98.0	MRM	['Cys']
P62334	Psmc6	AVASQLDCNFLK	Cerebrum	—	98.0	MRM	['Cys']
P32848	Pvalb	FFQMVGLK	Cerebrum	—	98.0	MRM	['Meth']
Q8VDD5	Myh9	ADFCIIHYAGK	BrainStem	—	98.0	MRM	['Cys']
P26443	Glud1	FTMELAK	Cerebrum	—	98.0	MRM	['Meth']
Q9Z0N1	Eif2s3x	IVLTNPVCTEVGEK	Cerebellum	—	98.0	MRM	['Cys']
Q8VDD5	Myh9	ADFCIIHYAGK	Cerebrum	—	98.0	MRM	['Cys']
Q99JW4	Lims1	CHAIIDEQPLIFK	BrainStem	—	98.0	MRM	['Cys']
Q8CI94	Pygb	TCFETFPDK	MockWholeBrain	—	98.0	MRM	['Cys']
P15105	Glul	ACLYAGVK	Cerebellum	—	98.0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	Cerebellum	—	97.9	MRM	['Cys']
Q8BWG8	Arrb1	AFCAENLEEK	Cerebellum	—	97.9	MRM	['Cys']
P26443	Glud1	FTMELAK	Cerebellum	—	97.9	MRM	['Meth']
Q61207	Psap	SLPCDICK	Cerebellum	—	97.9	MRM	['Cys']
Q7TNC9	Inpp5a	EIYSDTLESTPMLEK	Cerebellum	—	97.9	MRM	['Meth']
Q922D8	Mthfd1	GDLNDCFIPCTPK	Cerebrum	—	97.9	MRM	['Cys']
Q8VCT3	Rnpep	AFFPCFDTPAVK	BrainStem	—	97.9	MRM	['Cys']
P09411	Pgk1	FCLDNGAK	Cerebellum	—	97.9	MRM	['Cys']
P97447	Fhl1	GEDFYCVTCHETK	Cerebrum	—	97.9	MRM	['Cys']
P55264	Adk	TGCTFPEKPDFH	Cerebrum	—	97.9	MRM	['Cys']
P00493	Hprt1	SYCNDQSTGDIK	Cerebellum	—	97.9	MRM	['Cys']
Q9CQM9	Glrx3	ELEASEELDTICPK	Cerebrum	—	97.9	MRM	['Cys']
P84084	Arf5	NICFTVWDVGGQDK	MockWholeBrain	—	97.9	MRM	['Cys']
Q60790	Rasa3	LSEVITDTGVVCHK	Cerebellum	—	97.9	MRM	['Cys']
P68040	Rack1	FSPNSSNPIIVSCGWDK	Cerebellum	—	97.9	MRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	BrainStem	—	97.9	MRM	['Cys']
Q91YT0	Ndufv1	EGVDWMNK	MockWholeBrain	—	97.9	MRM	['Meth']
Q01853	Vcp	GVLFYGPPGCGK	MockWholeBrain	—	97.9	MRM	['Cys']
Q9CQA3	Sdhb	CGPMVLDALIK	MockWholeBrain	—	97.9	MRM	['Meth', 'Cys']
Q8BVI4	Qdpr	GAVHQLCQSLAGK	Cerebellum	—	97.9	MRM	['Cys']
Q9Z0N1	Eif2s3x	SCGSSTPDEFPTDIPGTK	Cerebrum	—	97.9	MRM	['Cys']
Q8BVI4	Qdpr	GAVHQLCQSLAGK	MockWholeBrain	—	97.9	MRM	['Cys']
Q9Z1Q5	Clic1	FLDGNELTLADCNLLPK	Cerebellum	—	97.9	MRM	['Cys']
Q6TEK5	Vkorc1l1	ALCDLGPWVK	Cerebrum	—	97.9	MRM	['Cys']
Q91VD9	Ndufs1	MCLVEIEK	BrainStem	—	97.9	MRM	['Meth', 'Cys']
P08249	Mdh2	FVFSLVDAMNGK	MockWholeBrain	—	97.9	MRM	['Meth']
Q9D0F9	Pgm1	IDAMHGVVGPYVK	Cerebrum	—	97.9	MRM	['Meth']
Q9D0F9	Pgm1	IDAMHGVVGPYVK	BrainStem	—	97.8	MRM	['Meth']
Q9DCZ1	Gmpr	STCTYVGAAK	Cerebrum	—	97.8	MRM	['Cys']

SysQuan Mouse Database

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