Welcome to SysQuan Mouse
You're looking at the coverage statistics for the SysQuan mouse atlas: how many proteins we can quantify, which tissues they were measured in, and the targeted assays (MRM, PRM) available for each. Mix your mouse samples with our pre-quantified K6-labelled mouse reference proteome to get absolute quantification for your proteins of interest. Explore our database →
Quantifiable Proteins
16169
Targeted Assays
2817
Tissues Covered
13
Protein Coverage by Tissue
| Tissue | Total | Quantifiable |
|---|---|---|
| BoneMarrow single injection | 5478 | 4058 |
| Brain stem | 12163 | 10062 |
| Cerebellum | 11772 | 9629 |
| Cerebrum | 12427 | 10280 |
| Kidney | 10282 | 8507 |
| Liver | 10501 | 8726 |
| Lung | 12241 | 10315 |
| Muscle single injection | 3030 | 2218 |
| Pancreas single injection | 3304 | 2637 |
| SmallIntestines single injection | 5508 | 4150 |
| Spermatozoa single injection | 2885 | 2142 |
| Spleen single injection | 5156 | 3726 |
| Tail skin single injection | 2154 | 1507 |
| Total Unique | 19232 | 16169 |
Tissues marked single injection were acquired without offline fractionation. All others were fractionated, which is why their protein counts are higher.
Phosphopeptides by Tissue
| Tissue | Total | Quantifiable |
|---|---|---|
| Brain stem | 4638 | 1872 |
| Cerebellum | 4795 | 1854 |
| Cerebrum | 5801 | 2338 |
| Liver | 2808 | 1159 |
| Total Unique | 10486 | 4133 |
Targeted Assays Available
| Tissue | MRM | PRM-PASEF | Total |
|---|---|---|---|
| BoneMarrow | 1384 | 278 | 1396 |
| Brain stem | 2373 | 480 | 2389 |
| Cerebellum | 2306 | 450 | 2317 |
| Cerebrum | 2332 | 456 | 2349 |
| Kidney | 2485 | 503 | 2504 |
| Liver | 2569 | 540 | 2587 |
| Lung | 2503 | 521 | 2520 |
| Muscle | 1029 | 201 | 1035 |
| Pancreas | 1175 | 220 | 1183 |
| SmallIntestines | 1555 | 306 | 1566 |
| Spermatozoa | 673 | 132 | 680 |
| Spleen | 1350 | 269 | 1359 |
| Tail skin | 750 | 166 | 757 |
Tissue-Specific Peptide Entries
Proteins Shared Across Tissues
Loading plot...