SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q8R0X7	Sgpl1	ESVTQIMK	Cerebrum	—	100.0	MRM	['Meth']
Q8R0Y6	Aldh1l1	AVQMGMSSVFFNK	Cerebellum	—	100.0	MRM	['Meth']
Q8R0Y6	Aldh1l1	SPLIIFADCDLNK	BrainStem	—	100.0	MRM	['Cys']
Q8R0Y6	Aldh1l1	SPLIIFADCDLNK	Cerebellum	—	100.0	MRM	['Cys']
Q8R0Y6	Aldh1l1	SPLIIFADCDLNK	Cerebrum	—	100.0	MRM	['Cys']
Q8R0Y6	Aldh1l1	TAACLAAGNTVVIKPAQVTPLTALK	Cerebellum	—	100.0	MRM	['Cys']
Q8R0Y6	Aldh1l1	TAACLAAGNTVVIKPAQVTPLTALK	Cerebrum	—	100.0	MRM	['Cys']
Q8R0Y6	Aldh1l1	YFAGWCDK	BrainStem	—	100.0	MRM	['Cys']
Q8R0Y6	Aldh1l1	YFAGWCDK	Cerebellum	—	100.0	MRM	['Cys']
Q8R0Y6	Aldh1l1	YFAGWCDK	Cerebrum	—	100.0	MRM	['Cys']
Q8R5I6	Gstm4	VCYSPDFEK	BrainStem	—	100.0	MRM	['Cys']
Q8R5I6	Gstm4	VCYSPDFEK	Cerebellum	—	100.0	MRM	['Cys']
Q8R5I6	Gstm4	VCYSPDFEK	Cerebrum	—	100.0	MRM	['Cys']
Q8R5I6	Gstm4	VCYSPDFEK	MockWholeBrain	—	100.0	MRM	['Cys']
Q8VC30	Tkfc	MGGSSGALYGLFLTAAAQPLK	BrainStem	—	100.0	MRM	['Meth']
Q8VC30	Tkfc	MGGSSGALYGLFLTAAAQPLK	Cerebellum	—	100.0	MRM	['Meth']
Q8VC30	Tkfc	MGGSSGALYGLFLTAAAQPLK	Cerebrum	—	100.0	MRM	['Meth']
Q8VCH6	Dhcr24	LYEQHHVVQDMLVPMK	Cerebrum	—	100.0	MRM	['Meth']
Q8VCT3	Rnpep	AFFPCFDTPAVK	MockWholeBrain	—	100.0	MRM	['Cys']
Q8VCT3	Rnpep	VGEGPGVCWLAPEQTAGK	BrainStem	—	100.0	MRM	['Cys']
Q8VDD5	Myh9	ADFCIIHYAGK	Cerebellum	—	100.0	MRM	['Cys']
Q8VDD5	Myh9	EDQSILCTGESGAGK	BrainStem	—	100.0	MRM	['Cys']
Q8VDD5	Myh9	IIGLDQVAGMSETALPGAFK	Cerebrum	—	100.0	MRM	['Meth']
Q91V12	Acot7	IMRPDDANVAGNVHGGTILK	BrainStem	—	100.0	MRM	['Meth']
Q91V12	Acot7	IMRPDDANVAGNVHGGTILK	Cerebellum	—	100.0	MRM	['Meth']
Q91V12	Acot7	IMRPDDANVAGNVHGGTILK	Cerebellum	—	100.0	MRM	['Meth']
Q91V12	Acot7	IMRPDDANVAGNVHGGTILK	Cerebrum	—	100.0	MRM	['Meth']
Q91V12	Acot7	IMRPDDANVAGNVHGGTILK	MockWholeBrain	—	100.0	MRM	['Meth']
Q91VA7	Idh3b	DMGGYSTTTDFIK	BrainStem	—	100.0	MRM	['Meth']
Q91VA7	Idh3b	DMGGYSTTTDFIK	Cerebrum	—	100.0	MRM	['Meth']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	BrainStem	—	100.0	MRM	['Meth']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	Cerebellum	—	100.0	MRM	['Meth']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	Cerebrum	—	100.0	MRM	['Meth']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	Cerebrum	—	100.0	MRM	['Meth']
Q91W43	Gldc	DISLVHSMIPLGSCTMK	BrainStem	—	100.0	MRM	['Meth', 'Cys']
Q91W43	Gldc	DISLVHSMIPLGSCTMK	Cerebellum	—	100.0	MRM	['Meth', 'Cys']
Q91W43	Gldc	DISLVHSMIPLGSCTMK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
Q91W43	Gldc	DISLVHSMIPLGSCTMK	MockWholeBrain	—	100.0	MRM	['Meth', 'Cys']
Q91W43	Gldc	SAHGTNPASAHMAGMK	Cerebellum	—	100.0	MRM	['Meth']
Q91W43	Gldc	SAHGTNPASAHMAGMK	Cerebrum	—	100.0	MRM	['Meth']
Q91W43	Gldc	SAHGTNPASAHMAGMK	MockWholeBrain	—	100.0	MRM	['Meth']
Q91W43	Gldc	TFCIPHGGGGPGMGPIGVK	Cerebellum	—	100.0	MRM	['Meth', 'Cys']
Q91W43	Gldc	TFCIPHGGGGPGMGPIGVK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
Q91W43	Gldc	TFCIPHGGGGPGMGPIGVK	MockWholeBrain	—	100.0	MRM	['Meth', 'Cys']
Q91WG8	Gne	ILLAGCPSYDK	BrainStem	—	100.0	MRM	['Cys']
Q91WG8	Gne	ILLAGCPSYDK	Cerebellum	—	100.0	MRM	['Cys']
Q91WG8	Gne	ILLAGCPSYDK	Cerebrum	—	100.0	MRM	['Cys']
Q91WG8	Gne	ILLAGCPSYDK	MockWholeBrain	—	100.0	MRM	['Cys']
Q91YQ5	Rpn1	VACITEQVLTLVNK	BrainStem	—	100.0	MRM	['Cys']
Q91YQ5	Rpn1	VACITEQVLTLVNK	Cerebellum	—	100.0	MRM	['Cys']

SysQuan Mouse Database

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