SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q8BPB5	Efemp1	DIDECDIVPDACK	MockWholeBrain	—	100.0	MRM	['Cys']
Q8BTM8	Flna	EEPCLLK	BrainStem	—	100.0	MRM	['Cys']
Q8BTM8	Flna	EEPCLLK	Cerebellum	—	100.0	MRM	['Cys']
Q8BTM8	Flna	EEPCLLK	Cerebrum	—	100.0	MRM	['Cys']
Q8BTM8	Flna	VTYCPTEPGNYIINIK	Cerebellum	—	100.0	MRM	['Cys']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	Cerebellum	—	100.0	MRM	['Meth']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	MockWholeBrain	—	100.0	MRM	['Meth']
Q8BVI4	Qdpr	GAVHQLCQSLAGK	BrainStem	—	100.0	MRM	['Cys']
Q8BVI4	Qdpr	GAVHQLCQSLAGK	Cerebrum	—	100.0	MRM	['Cys']
Q8BVI4	Qdpr	VDAILCVAGGWAGGNAK	BrainStem	—	100.0	MRM	['Cys']
Q8BVI4	Qdpr	VDAILCVAGGWAGGNAK	Cerebellum	—	100.0	MRM	['Cys']
Q8BWF0	Aldh5a1	VAEQLEVGMVGVNEGLISSVECPFGGVK	BrainStem	—	100.0	MRM	['Meth', 'Cys']
Q8BWF0	Aldh5a1	VAEQLEVGMVGVNEGLISSVECPFGGVK	Cerebellum	—	100.0	MRM	['Meth', 'Cys']
Q8BWF0	Aldh5a1	VAEQLEVGMVGVNEGLISSVECPFGGVK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
Q8BWF0	Aldh5a1	VAEQLEVGMVGVNEGLISSVECPFGGVK	MockWholeBrain	—	100.0	MRM	['Meth', 'Cys']
Q8BWG8	Arrb1	ACGVDYEVK	BrainStem	—	100.0	MRM	['Cys']
Q8BWG8	Arrb1	ACGVDYEVK	Cerebrum	—	100.0	MRM	['Cys']
Q8BWG8	Arrb1	AFCAENLEEK	BrainStem	—	100.0	MRM	['Cys']
Q8BWG8	Arrb1	AFCAENLEEK	Cerebrum	—	100.0	MRM	['Cys']
Q8C5H8	Nadk2	SSGLNLCTGTGSK	BrainStem	—	100.0	MRM	['Cys']
Q8CGC7	Eprs1	AYVDDTPAEQMK	BrainStem	—	100.0	MRM	['Meth']
Q8CGC7	Eprs1	AYVDDTPAEQMK	Cerebellum	—	100.0	MRM	['Meth']
Q8CGC7	Eprs1	AYVDDTPAEQMK	Cerebrum	—	100.0	MRM	['Meth']
Q8CI94	Pygb	AAPGYHMAK	BrainStem	—	100.0	MRM	['Meth']
Q8CI94	Pygb	AAPGYHMAK	BrainStem	—	100.0	MRM	['Meth']
Q8CI94	Pygb	AAPGYHMAK	Cerebellum	—	100.0	MRM	['Meth']
Q8CI94	Pygb	AAPGYHMAK	Cerebrum	—	100.0	MRM	['Meth']
Q8CI94	Pygb	TCFETFPDK	BrainStem	—	100.0	MRM	['Cys']
Q8CI94	Pygb	TCFETFPDK	Cerebellum	—	100.0	MRM	['Cys']
Q8CIF4	Btd	ILSGDPYCEK	Cerebellum	—	100.0	MRM	['Cys']
Q8JZR0	Acsl5	AEYLGSCLLHK	BrainStem	—	100.0	MRM	['Cys']
Q8JZR0	Acsl5	AEYLGSCLLHK	Cerebrum	—	100.0	MRM	['Cys']
Q8K021	Scamp1	AQQEFATGVMSNK	Cerebrum	—	100.0	MRM	['Meth']
Q8K0E8	Fgb	MGPTELLIEMEDWK	BrainStem	—	100.0	MRM	['Meth']
Q8K0E8	Fgb	MGPTELLIEMEDWK	Cerebellum	—	100.0	MRM	['Meth']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	BrainStem	—	100.0	MRM	['Cys']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	Cerebrum	—	100.0	MRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	BrainStem	—	100.0	MRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	Cerebellum	—	100.0	MRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	Cerebrum	—	100.0	MRM	['Cys']
Q8K358	Pigu	DGTEAMLVLK	BrainStem	—	100.0	MRM	['Meth']
Q8K358	Pigu	DGTEAMLVLK	Cerebellum	—	100.0	MRM	['Meth']
Q8K358	Pigu	DGTEAMLVLK	Cerebrum	—	100.0	MRM	['Meth']
Q8K358	Pigu	DGTEAMLVLK	MockWholeBrain	—	100.0	MRM	['Meth']
Q8K3J1	Ndufs8	YDIDMTK	Cerebellum	—	100.0	MRM	['Meth']
Q8R016	Blmh	DGEAVWFGCDVGK	BrainStem	—	100.0	MRM	['Cys']
Q8R016	Blmh	DGEAVWFGCDVGK	Cerebellum	—	100.0	MRM	['Cys']
Q8R016	Blmh	DGEAVWFGCDVGK	Cerebrum	—	100.0	MRM	['Cys']
Q8R016	Blmh	DGEAVWFGCDVGK	MockWholeBrain	—	100.0	MRM	['Cys']
Q8R0X7	Sgpl1	ESVTQIMK	Cerebellum	—	100.0	MRM	['Meth']

SysQuan Mouse Database

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