SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
O35598	Adam10	EAVIAQISSHVK	BrainStem	—	100.0	MRM	—
O35598	Adam10	EAVIAQISSHVK	Cerebellum	—	100.0	MRM	—
O35598	Adam10	EAVIAQISSHVK	Cerebrum	—	100.0	MRM	—
O35598	Adam10	EAVIAQISSHVK	MockWholeBrain	—	100.0	MRM	—
O35623	Bet1	SLSIEIGHEVK	BrainStem	—	100.0	MRM	—
O35623	Bet1	SLSIEIGHEVK	Cerebrum	—	100.0	MRM	—
O35623	Bet1	SLSIEIGHEVK	MockWholeBrain	—	100.0	MRM	—
O35638	Stag2	LELLLQK	BrainStem	—	100.0	MRM	—
O35730	Ring1	SLRPDPNFDALISK	BrainStem	—	100.0	MRM	—
O35730	Ring1	SLRPDPNFDALISK	Cerebellum	—	100.0	MRM	—
O35730	Ring1	SLRPDPNFDALISK	Cerebrum	—	100.0	MRM	—
O35730	Ring1	SLRPDPNFDALISK	MockWholeBrain	—	100.0	MRM	—
O35737	Hnrnph1	PSGEAFVELESEDEVK	BrainStem	—	100.0	MRM	—
O35737	Hnrnph1	PSGEAFVELESEDEVK	Cerebellum	—	100.0	MRM	—
O35737	Hnrnph1	PSGEAFVELESEDEVK	Cerebrum	—	100.0	MRM	—
O35737	Hnrnph1	PSGEAFVELESEDEVK	MockWholeBrain	—	100.0	MRM	—
O54734	Ddost	LPDVYGVFQFK	BrainStem	—	100.0	MRM	—
O54734	Ddost	LPDVYGVFQFK	Cerebellum	—	100.0	MRM	—
O54734	Ddost	LPDVYGVFQFK	Cerebrum	—	100.0	MRM	—
O54734	Ddost	LPDVYGVFQFK	MockWholeBrain	—	100.0	MRM	—
O54774	Ap3d1	ILIEDSDQNLK	BrainStem	—	100.0	MRM	—
O54774	Ap3d1	ILIEDSDQNLK	Cerebrum	—	100.0	MRM	—
O54782	Man2b2	WAVSEVQHHDAITGTESPK	Cerebrum	—	100.0	MRM	—
O54782	Man2b2	WAVSEVQHHDAITGTESPK	MockWholeBrain	—	100.0	MRM	—
O54865	Gucy1b1	EGLQDIVIGIIK	BrainStem	—	100.0	MRM	—
O54865	Gucy1b1	EGLQDIVIGIIK	Cerebellum	—	100.0	MRM	—
O54865	Gucy1b1	EGLQDIVIGIIK	Cerebrum	—	100.0	MRM	—
O54865	Gucy1b1	EGLQDIVIGIIK	MockWholeBrain	—	100.0	MRM	—
O54890	Itgb3	NDASHLLVFTTDAK	BrainStem	—	100.0	MRM	—
O54890	Itgb3	NDASHLLVFTTDAK	Cerebellum	—	100.0	MRM	—
O54890	Itgb3	NDASHLLVFTTDAK	Cerebrum	—	100.0	MRM	—
O55023	Impa1	LQVSQQEDITK	BrainStem	—	100.0	MRM	—
O55023	Impa1	LQVSQQEDITK	Cerebellum	—	100.0	MRM	—
O55023	Impa1	LQVSQQEDITK	Cerebrum	—	100.0	MRM	—
O55023	Impa1	LQVSQQEDITK	liver	—	100.0	MRM	—
O55029	Copb2	GSNNVALGYDEGSIIVK	BrainStem	—	100.0	MRM	—
O55029	Copb2	GSNNVALGYDEGSIIVK	Cerebellum	—	100.0	MRM	—
O55029	Copb2	GSNNVALGYDEGSIIVK	Cerebrum	—	100.0	MRM	—
O55029	Copb2	GSNNVALGYDEGSIIVK	liver	—	100.0	MRM	—
O55042	Snca	EQVTNVGGAVVTGVTAVAQK	BrainStem	—	100.0	MRM	—
O55042	Snca	EQVTNVGGAVVTGVTAVAQK	Cerebellum	—	100.0	MRM	—
O55042	Snca	EQVTNVGGAVVTGVTAVAQK	Cerebrum	—	100.0	MRM	—
O55042	Snca	EQVTNVGGAVVTGVTAVAQK	liver	—	100.0	MRM	—
O55042	Snca	EQVTNVGGAVVTGVTAVAQK	MockWholeBrain	—	100.0	MRM	—
O55060	Tpmt	LYLLTEK	Cerebellum	—	100.0	MRM	—
O55106	Strn	SELTDSASVLDNFK	Cerebrum	—	100.0	MRM	—
O55131	Septin7	IYEFPETDDEEENK	BrainStem	—	100.0	MRM	—
O55142	Rpl35a	AIFAGYK	BrainStem	—	100.0	MRM	—
O55142	Rpl35a	AIFAGYK	Cerebellum	—	100.0	MRM	—
O55142	Rpl35a	AIFAGYK	Cerebrum	—	100.0	MRM	—

SysQuan Mouse Database

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