SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q68FD5	Cltc	LECSEELGDLVK	Cerebellum	—	100.0	MRM	['Cys']
Q68FD5	Cltc	LECSEELGDLVK	Cerebrum	—	100.0	MRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	BrainStem	—	100.0	MRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	Cerebellum	—	100.0	MRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	Cerebrum	—	100.0	MRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	MockWholeBrain	—	100.0	MRM	['Cys']
Q68FL4	Ahcyl2	LCVPAMNVNDSVTK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
Q6IRU2	Tpm4	CGDLEEELK	BrainStem	—	100.0	MRM	['Cys']
Q6IRU2	Tpm4	CGDLEEELK	Cerebrum	—	100.0	MRM	['Cys']
Q6IRU2	Tpm4	CGDLEEELK	MockWholeBrain	—	100.0	MRM	['Cys']
Q6PF93	Pik3c3	MNLSDVELIPLPLEPQVK	BrainStem	—	100.0	MRM	['Meth']
Q6PF93	Pik3c3	MNLSDVELIPLPLEPQVK	Cerebellum	—	100.0	MRM	['Meth']
Q6PF93	Pik3c3	MNLSDVELIPLPLEPQVK	Cerebrum	—	100.0	MRM	['Meth']
Q6ZPJ3	Ube2o	LIGTNCIIYPVNSK	BrainStem	—	100.0	MRM	['Cys']
Q6ZPJ3	Ube2o	LIGTNCIIYPVNSK	Cerebrum	—	100.0	MRM	['Cys']
Q711T7	Nadsyn1	YDCSSADINPIGGISK	BrainStem	—	100.0	MRM	['Cys']
Q711T7	Nadsyn1	YDCSSADINPIGGISK	Cerebrum	—	100.0	MRM	['Cys']
Q7TNC9	Inpp5a	EIYSDTLESTPMLEK	Cerebrum	—	100.0	MRM	['Meth']
Q7TPR4	Actn1	CQLEINFNTLQTK	BrainStem	—	100.0	MRM	['Cys']
Q7TPR4	Actn1	CQLEINFNTLQTK	Cerebellum	—	100.0	MRM	['Cys']
Q80SW1	Ahcyl1	LCVPAMNVNDSVTK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
Q80SW1	Ahcyl1	LCVPAMNVNDSVTK	MockWholeBrain	—	100.0	MRM	['Meth', 'Cys']
Q80SW1	Ahcyl1	QVDVVITCTGNK	BrainStem	—	100.0	MRM	['Cys']
Q80SW1	Ahcyl1	QVDVVITCTGNK	Cerebellum	—	100.0	MRM	['Cys']
Q80SW1	Ahcyl1	QVDVVITCTGNK	Cerebrum	—	100.0	MRM	['Cys']
Q80W21	Gstm7	CLDAFPNLK	Cerebellum	—	100.0	MRM	['Cys']
Q80W21	Gstm7	CLDAFPNLK	Cerebrum	—	100.0	MRM	['Cys']
Q80W21	Gstm7	CLDAFPNLK	MockWholeBrain	—	100.0	MRM	['Cys']
Q80XN0	Bdh1	GFLVFAGCLMK	BrainStem	—	100.0	MRM	['Meth', 'Cys']
Q80XN0	Bdh1	GFLVFAGCLMK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
Q80XN0	Bdh1	GFLVFAGCLMK	MockWholeBrain	—	100.0	MRM	['Meth', 'Cys']
Q80XN0	Bdh1	SPYCITK	BrainStem	—	100.0	MRM	['Cys']
Q80XN0	Bdh1	SPYCITK	Cerebrum	—	100.0	MRM	['Cys']
Q80XN0	Bdh1	SPYCITK	MockWholeBrain	—	100.0	MRM	['Cys']
Q80YX1	Tnc	ACGCAAAPDVK	MockWholeBrain	—	100.0	MRM	['Cys']
Q80YX1	Tnc	DTDSAITNCALSYK	Cerebellum	—	100.0	MRM	['Cys']
Q80YX1	Tnc	DTDSAITNCALSYK	MockWholeBrain	—	100.0	MRM	['Cys']
Q8BH43	Wasf2	MGQEFVESK	Cerebrum	—	100.0	MRM	['Meth']
Q8BH43	Wasf2	MGQEFVESK	MockWholeBrain	—	100.0	MRM	['Meth']
Q8BKZ9	Pdhx	STVPHAYATADCDLGAVLK	BrainStem	—	100.0	MRM	['Cys']
Q8BKZ9	Pdhx	STVPHAYATADCDLGAVLK	Cerebellum	—	100.0	MRM	['Cys']
Q8BKZ9	Pdhx	STVPHAYATADCDLGAVLK	Cerebrum	—	100.0	MRM	['Cys']
Q8BMF4	Dlat	YLEKPITMLL	Cerebellum	—	100.0	MRM	['Meth']
Q8BMF4	Dlat	YLEKPITMLL	Cerebrum	—	100.0	MRM	['Meth']
Q8BML9	Qars1	NEVDMQVLHLLGPK	Cerebellum	—	100.0	MRM	['Meth']
Q8BML9	Qars1	NEVDMQVLHLLGPK	Cerebrum	—	100.0	MRM	['Meth']
Q8BMS1	Hadha	VIGMHYFSPVDK	BrainStem	—	100.0	MRM	['Meth']
Q8BMS1	Hadha	VIGMHYFSPVDK	BrainStem	—	100.0	MRM	['Meth']
Q8BMS1	Hadha	VIGMHYFSPVDK	Cerebellum	—	100.0	MRM	['Meth']
Q8BPB5	Efemp1	DIDECDIVPDACK	Cerebrum	—	100.0	MRM	['Cys']

SysQuan Mouse Database

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