SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q5SWU9	Acaca	EEAISNMVVALK	MockWholeBrain	—	100.0	MRM	['Meth']
Q5SWU9	Acaca	FVVMVTPEDLK	Cerebellum	—	100.0	MRM	['Meth']
Q5SWU9	Acaca	FVVMVTPEDLK	Cerebrum	—	100.0	MRM	['Meth']
Q5SWU9	Acaca	FVVMVTPEDLK	MockWholeBrain	—	100.0	MRM	['Meth']
Q60605	Myl6	CDFTEDQTAEFK	Cerebellum	—	100.0	MRM	['Cys']
Q60605	Myl6	CDFTEDQTAEFK	Cerebrum	—	100.0	MRM	['Cys']
Q60790	Rasa3	ALYIQANNCVEAK	BrainStem	—	100.0	MRM	['Cys']
Q60790	Rasa3	LSEVITDTGVVCHK	BrainStem	—	100.0	MRM	['Cys']
Q60790	Rasa3	LSEVITDTGVVCHK	Cerebrum	—	100.0	MRM	['Cys']
Q60864	Stip1	ALDLDSSCK	BrainStem	—	100.0	MRM	['Cys']
Q60864	Stip1	ALDLDSSCK	Cerebellum	—	100.0	MRM	['Cys']
Q60864	Stip1	ALDLDSSCK	Cerebrum	—	100.0	MRM	['Cys']
Q60864	Stip1	DCEECIQLEPTFIK	Cerebellum	—	100.0	MRM	['Cys']
Q60864	Stip1	DCEECIQLEPTFIK	MockWholeBrain	—	100.0	MRM	['Cys']
Q60930	Vdac2	WCEYGLTFTEK	Cerebellum	—	100.0	MRM	['Cys']
Q61207	Psap	SLPCDICK	BrainStem	—	100.0	MRM	['Cys']
Q61207	Psap	SLPCDICK	Cerebrum	—	100.0	MRM	['Cys']
Q61207	Psap	SLPCDICK	MockWholeBrain	—	100.0	MRM	['Cys']
Q61699	Hsph1	GCALQCAILSPAFK	MockWholeBrain	—	100.0	MRM	['Cys']
Q61739	Itga6	EGCGDDNVCNSNLK	BrainStem	—	100.0	MRM	['Cys']
Q61739	Itga6	EGCGDDNVCNSNLK	Cerebrum	—	100.0	MRM	['Cys']
Q61739	Itga6	EGCGDDNVCNSNLK	MockWholeBrain	—	100.0	MRM	['Cys']
Q61739	Itga6	FGSCQQGVAATFTK	BrainStem	—	100.0	MRM	['Cys']
Q61739	Itga6	FGSCQQGVAATFTK	Cerebellum	—	100.0	MRM	['Cys']
Q61739	Itga6	FGSCQQGVAATFTK	Cerebrum	—	100.0	MRM	['Cys']
Q61937	Npm1	DELHIVEAEAMNYEGSPIK	BrainStem	—	100.0	MRM	['Meth']
Q61937	Npm1	DELHIVEAEAMNYEGSPIK	Cerebrum	—	100.0	MRM	['Meth']
Q61937	Npm1	DELHIVEAEAMNYEGSPIK	MockWholeBrain	—	100.0	MRM	['Meth']
Q61990	Pcbp2	LVVPASQCGSLIGK	Cerebellum	—	100.0	MRM	['Cys']
Q62261	Sptbn1	FLQDCQELSLWINEK	BrainStem	—	100.0	MRM	['Cys']
Q62261	Sptbn1	FLQDCQELSLWINEK	Cerebellum	—	100.0	MRM	['Cys']
Q62261	Sptbn1	FLQDCQELSLWINEK	Cerebrum	—	100.0	MRM	['Cys']
Q64133	Maoa	ICELYAK	BrainStem	—	100.0	MRM	['Cys']
Q64133	Maoa	ICELYAK	Cerebellum	—	100.0	MRM	['Cys']
Q64133	Maoa	ICELYAK	Cerebrum	—	100.0	MRM	['Cys']
Q64133	Maoa	ICELYAK	MockWholeBrain	—	100.0	MRM	['Cys']
Q64133	Maoa	LPMGAVIK	BrainStem	—	100.0	MRM	['Meth']
Q64133	Maoa	LPMGAVIK	Cerebellum	—	100.0	MRM	['Meth']
Q642K0	Myl6	CDFTEDQTAEFK	Cerebrum	—	100.0	MRM	['Cys']
Q64727	Vcl	VGELCAGK	BrainStem	—	100.0	MRM	['Cys']
Q64727	Vcl	VGELCAGK	Cerebellum	—	100.0	MRM	['Cys']
Q64727	Vcl	VGELCAGK	Cerebrum	—	100.0	MRM	['Cys']
Q64727	Vcl	VGELCAGK	MockWholeBrain	—	100.0	MRM	['Cys']
Q64737	Gart	FGDPECQVILPLLK	Cerebellum	—	100.0	MRM	['Cys']
Q64737	Gart	FGDPECQVILPLLK	Cerebrum	—	100.0	MRM	['Cys']
Q64737	Gart	FGDPECQVILPLLK	MockWholeBrain	—	100.0	MRM	['Cys']
Q68FD5	Cltc	AHIAQLCEK	BrainStem	—	100.0	MRM	['Cys']
Q68FD5	Cltc	AHIAQLCEK	Cerebrum	—	100.0	MRM	['Cys']
Q68FD5	Cltc	AHIAQLCEK	MockWholeBrain	—	100.0	MRM	['Cys']
Q68FD5	Cltc	LECSEELGDLVK	BrainStem	—	100.0	MRM	['Cys']

SysQuan Mouse Database

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