SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P97467	Pam	VVNSDISCHYK	Cerebrum	—	100.0	MRM	['Cys']
P97467	Pam	VVNSDISCHYK	MockWholeBrain	—	100.0	MRM	['Cys']
P97807	Fh	SGLGELILPENEPGSSIMPGK	BrainStem	—	100.0	MRM	['Meth']
P97807	Fh	SGLGELILPENEPGSSIMPGK	Cerebrum	—	100.0	MRM	['Meth']
P99029	Prdx5	GVLFGVPGAFTPGCSK	BrainStem	—	100.0	MRM	['Cys']
P99029	Prdx5	GVLFGVPGAFTPGCSK	Cerebellum	—	100.0	MRM	['Cys']
P99029	Prdx5	GVLFGVPGAFTPGCSK	Cerebrum	—	100.0	MRM	['Cys']
Q01279	Egfr	GPDNCIQCAHYIDGPHCVK	BrainStem	—	100.0	MRM	['Cys']
Q01279	Egfr	GPDNCIQCAHYIDGPHCVK	Cerebellum	—	100.0	MRM	['Cys']
Q01279	Egfr	GPDNCIQCAHYIDGPHCVK	Cerebrum	—	100.0	MRM	['Cys']
Q01279	Egfr	GPDNCIQCAHYIDGPHCVK	MockWholeBrain	—	100.0	MRM	['Cys']
Q01279	Egfr	YSFGATCVK	Cerebellum	—	100.0	MRM	['Cys']
Q01853	Vcp	AIANECQANFISIK	BrainStem	—	100.0	MRM	['Cys']
Q01853	Vcp	AIANECQANFISIK	Cerebellum	—	100.0	MRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	Cerebellum	—	100.0	MRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	Cerebrum	—	100.0	MRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	MockWholeBrain	—	100.0	MRM	['Cys']
Q02053	Uba1	SIPICTLK	BrainStem	—	100.0	MRM	['Cys']
Q02053	Uba1	SIPICTLK	Cerebrum	—	100.0	MRM	['Cys']
Q02053	Uba1	SIPICTLK	MockWholeBrain	—	100.0	MRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	Cerebrum	—	100.0	MRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	MockWholeBrain	—	100.0	MRM	['Cys']
Q04447	Ckb	LGFSEVELVQMVVDGVK	Cerebellum	—	100.0	MRM	['Meth']
Q04447	Ckb	LGFSEVELVQMVVDGVK	Cerebrum	—	100.0	MRM	['Meth']
Q04447	Ckb	LGFSEVELVQMVVDGVK	MockWholeBrain	—	100.0	MRM	['Meth']
Q3KQJ4	Hspa8	VCNPIITK	BrainStem	—	100.0	MRM	['Cys']
Q3TH04	Hspa8	VCNPIITK	Cerebellum	—	100.0	MRM	['Cys']
Q3TH04	Hspa8	VCNPIITK	Cerebrum	—	100.0	MRM	['Cys']
Q3TR40	Thbs1	LCNNPTPQFGGK	Cerebellum	—	100.0	MRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	BrainStem	—	100.0	MRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	Cerebellum	—	100.0	MRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	Cerebrum	—	100.0	MRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	BrainStem	—	100.0	MRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	Cerebrum	—	100.0	MRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	MockWholeBrain	—	100.0	MRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	BrainStem	—	100.0	MRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	Cerebellum	—	100.0	MRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	Cerebrum	—	100.0	MRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	MockWholeBrain	—	100.0	MRM	['Cys']
Q3UH17	Fn1	WCGTTQNYDADQK	MockWholeBrain	—	100.0	MRM	['Cys']
Q3UL78	Cdc42	YVECSALTQK	MockWholeBrain	—	100.0	MRM	['Cys']
Q3UUI3	Them4	LLFDQFMK	BrainStem	—	100.0	MRM	['Meth']
Q3UUI3	Them4	LLFDQFMK	Cerebellum	—	100.0	MRM	['Meth']
Q3UUI3	Them4	LLFDQFMK	Cerebrum	—	100.0	MRM	['Meth']
Q3UUI3	Them4	LLFDQFMK	MockWholeBrain	—	100.0	MRM	['Meth']
Q3UZ14	Eef2	STLTDSLVCK	BrainStem	—	100.0	MRM	['Cys']
Q3V117	Acly	GVTIIGPATVGGIKPGCFK	BrainStem	—	100.0	MRM	['Cys']
Q3V117	Acly	GVTIIGPATVGGIKPGCFK	Cerebellum	—	100.0	MRM	['Cys']
Q3V117	Acly	GVTIIGPATVGGIKPGCFK	Cerebrum	—	100.0	MRM	['Cys']
Q5SV64	Myh10	EDQSILCTGESGAGK	BrainStem	—	100.0	MRM	['Cys']

SysQuan Mouse Database

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