SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P62880	Gnb2	TFVSGACDASIK	Cerebrum	—	100.0	MRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	MockWholeBrain	—	100.0	MRM	['Cys']
P63001	Rac1	CVVVGDGAVGK	Cerebrum	—	100.0	MRM	['Cys']
P63017	Hspa8	VCNPIITK	BrainStem	—	100.0	MRM	['Cys']
P63017	Hspa8	VCNPIITK	Cerebellum	—	100.0	MRM	['Cys']
P63017	Hspa8	VCNPIITK	Cerebrum	—	100.0	MRM	['Cys']
P63017	Hspa8	VCNPIITK	MockWholeBrain	—	100.0	MRM	['Cys']
P63028	Tpt1	EIADGLCLEVEGK	BrainStem	—	100.0	MRM	['Cys']
P63028	Tpt1	EIADGLCLEVEGK	Cerebrum	—	100.0	MRM	['Cys']
P63101	Ywhaz	DICNDVLSLLEK	BrainStem	—	100.0	MRM	['Cys']
P63101	Ywhaz	DICNDVLSLLEK	Cerebrum	—	100.0	MRM	['Cys']
P63323	Rps12	LVEALCAEHQINLIK	Cerebellum	—	100.0	MRM	['Cys']
P63323	Rps12	LVEALCAEHQINLIK	Cerebrum	—	100.0	MRM	['Cys']
P68040	Rack1	FSPNSSNPIIVSCGWDK	BrainStem	—	100.0	MRM	['Cys']
P68040	Rack1	FSPNSSNPIIVSCGWDK	Cerebrum	—	100.0	MRM	['Cys']
P68040	Rack1	FSPNSSNPIIVSCGWDK	MockWholeBrain	—	100.0	MRM	['Cys']
P68040	Rack1	YWLCAATGPSIK	Cerebrum	—	100.0	MRM	['Cys']
P68368	Tuba4a	SIQFVDWCPTGFK	Cerebrum	—	100.0	MRM	['Cys']
P68368	Tuba4a	SIQFVDWCPTGFK	MockWholeBrain	—	100.0	MRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	BrainStem	—	100.0	MRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	Cerebrum	—	100.0	MRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	MockWholeBrain	—	100.0	MRM	['Cys']
P68369	Tuba1a	TIQFVDWCPTGFK	Cerebellum	—	100.0	MRM	['Cys']
P68510	Ywhah	NCNDFQYESK	Cerebellum	—	100.0	MRM	['Cys']
P68510	Ywhah	NCNDFQYESK	Cerebrum	—	100.0	MRM	['Cys']
P70404	Idh3g	HTVTMIPGDGIGPELMLHVK	BrainStem	—	100.0	MRM	['Meth']
P70404	Idh3g	HTVTMIPGDGIGPELMLHVK	Cerebrum	—	100.0	MRM	['Meth']
P80313	Cct7	QLCDNAGFDATNILNK	BrainStem	—	100.0	MRM	['Cys']
P80313	Cct7	QLCDNAGFDATNILNK	Cerebellum	—	100.0	MRM	['Cys']
P80316	Cct5	IAILTCPFEPPKPK	BrainStem	—	100.0	MRM	['Cys']
P80316	Cct5	IAILTCPFEPPKPK	Cerebellum	—	100.0	MRM	['Cys']
P80316	Cct5	IAILTCPFEPPKPK	Cerebrum	—	100.0	MRM	['Cys']
P80316	Cct5	IAILTCPFEPPKPK	MockWholeBrain	—	100.0	MRM	['Cys']
P82198	Tgfbi	STVISYECCPGYEK	BrainStem	—	100.0	MRM	['Cys']
P82198	Tgfbi	STVISYECCPGYEK	Cerebellum	—	100.0	MRM	['Cys']
P84084	Arf5	NICFTVWDVGGQDK	Cerebrum	—	100.0	MRM	['Cys']
P97315	Csrp1	TVYFAEEVQCEGNSFHK	BrainStem	—	100.0	MRM	['Cys']
P97315	Csrp1	TVYFAEEVQCEGNSFHK	Cerebellum	—	100.0	MRM	['Cys']
P97315	Csrp1	TVYFAEEVQCEGNSFHK	Cerebrum	—	100.0	MRM	['Cys']
P97447	Fhl1	DCFTCSNCK	BrainStem	—	100.0	MRM	['Cys']
P97447	Fhl1	DCFTCSNCK	Cerebellum	—	100.0	MRM	['Cys']
P97447	Fhl1	DCFTCSNCK	Cerebrum	—	100.0	MRM	['Cys']
P97447	Fhl1	DCFTCSNCK	MockWholeBrain	—	100.0	MRM	['Cys']
P97447	Fhl1	FTAVEDQYYCVDCYK	BrainStem	—	100.0	MRM	['Cys']
P97447	Fhl1	FTAVEDQYYCVDCYK	Cerebellum	—	100.0	MRM	['Cys']
P97447	Fhl1	GEDFYCVTCHETK	BrainStem	—	100.0	MRM	['Cys']
P97457	Myl11	NICYVITHGDAK	BrainStem	—	100.0	MRM	['Cys']
P97457	Myl11	NICYVITHGDAK	Cerebrum	—	100.0	MRM	['Cys']
P97467	Pam	VVNSDISCHYK	BrainStem	—	100.0	MRM	['Cys']
P97467	Pam	VVNSDISCHYK	Cerebellum	—	100.0	MRM	['Cys']

SysQuan Mouse Database

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