SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P35235	Ptpn11	GVDCDIDVPK	BrainStem	—	100.0	MRM	['Cys']
P35235	Ptpn11	GVDCDIDVPK	Cerebrum	—	100.0	MRM	['Cys']
P39876	Timp3	SCYYLPCFVTSK	BrainStem	—	100.0	MRM	['Cys']
P39876	Timp3	SCYYLPCFVTSK	Cerebellum	—	100.0	MRM	['Cys']
P39876	Timp3	SCYYLPCFVTSK	MockWholeBrain	—	100.0	MRM	['Cys']
P40124	Cap1	CVNTTLQIK	BrainStem	—	100.0	MRM	['Cys']
P40124	Cap1	CVNTTLQIK	Cerebrum	—	100.0	MRM	['Cys']
P40124	Cap1	CVNTTLQIK	MockWholeBrain	—	100.0	MRM	['Cys']
P40124	Cap1	NSLDCEIVSAK	BrainStem	—	100.0	MRM	['Cys']
P40124	Cap1	NSLDCEIVSAK	Cerebellum	—	100.0	MRM	['Cys']
P40124	Cap1	NSLDCEIVSAK	Cerebrum	—	100.0	MRM	['Cys']
P40124	Cap1	TDGCHAYLSK	BrainStem	—	100.0	MRM	['Cys']
P40124	Cap1	TDGCHAYLSK	Cerebellum	—	100.0	MRM	['Cys']
P40124	Cap1	TDGCHAYLSK	MockWholeBrain	—	100.0	MRM	['Cys']
P42932	Cct8	QITSYGETCPGLEQYAIK	Cerebellum	—	100.0	MRM	['Cys']
P46664	Adss2	LDILDMFTEIK	BrainStem	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	BrainStem	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	Cerebellum	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	Cerebrum	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	MockWholeBrain	—	100.0	MRM	['Meth']
P47757	Capzb	GCWDSIHVVEVQEK	BrainStem	—	100.0	MRM	['Cys']
P47757	Capzb	GCWDSIHVVEVQEK	Cerebrum	—	100.0	MRM	['Cys']
P47791	Gsr	LGGTCVNVGCVPK	BrainStem	—	100.0	MRM	['Cys']
P47791	Gsr	LGGTCVNVGCVPK	Cerebellum	—	100.0	MRM	['Cys']
P47791	Gsr	LGGTCVNVGCVPK	MockWholeBrain	—	100.0	MRM	['Cys']
P48193	Epb41	VSLLDDTVYECVVEK	Cerebellum	—	100.0	MRM	['Cys']
P48193	Epb41	VSLLDDTVYECVVEK	Cerebrum	—	100.0	MRM	['Cys']
P48193	Epb41	VSLLDDTVYECVVEK	MockWholeBrain	—	100.0	MRM	['Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	BrainStem	—	100.0	MRM	['Meth', 'Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	Cerebellum	—	100.0	MRM	['Meth', 'Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
P50431	Shmt1	AVLEALGSCLNNK	BrainStem	—	100.0	MRM	['Cys']
P50431	Shmt1	AVLEALGSCLNNK	Cerebrum	—	100.0	MRM	['Cys']
P50431	Shmt1	VLEACSIACNK	BrainStem	—	100.0	MRM	['Cys']
P50431	Shmt1	VLEACSIACNK	Cerebellum	—	100.0	MRM	['Cys']
P50431	Shmt1	VLEACSIACNK	Cerebrum	—	100.0	MRM	['Cys']
P50544	Acadvl	LFVALQGCMDK	BrainStem	—	100.0	MRM	['Meth', 'Cys']
P50544	Acadvl	LFVALQGCMDK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
P50544	Acadvl	LFVALQGCMDK	MockWholeBrain	—	100.0	MRM	['Meth', 'Cys']
P50544	Acadvl	SFAVGMFK	BrainStem	—	100.0	MRM	['Meth']
P50544	Acadvl	SFAVGMFK	Cerebellum	—	100.0	MRM	['Meth']
P50544	Acadvl	SFAVGMFK	Cerebrum	—	100.0	MRM	['Meth']
P50544	Acadvl	SFAVGMFK	MockWholeBrain	—	100.0	MRM	['Meth']
P52480	Pkm	CDENILWLDYK	BrainStem	—	100.0	MRM	['Cys']
P52480	Pkm	GIFPVLCK	BrainStem	—	100.0	MRM	['Cys']
P52480	Pkm	GIFPVLCK	Cerebellum	—	100.0	MRM	['Cys']
P53395	Dbt	LAMENNIK	BrainStem	—	100.0	MRM	['Meth']
P53395	Dbt	LAMENNIK	Cerebrum	—	100.0	MRM	['Meth']
P53395	Dbt	LSFMPFFLK	Cerebellum	—	100.0	MRM	['Meth']

SysQuan Mouse Database

Cart (0)