SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P06801	Me1	AECSAEQCYK	Cerebellum	—	100.0	MRM	['Cys']
P06801	Me1	AECSAEQCYK	Cerebrum	—	100.0	MRM	['Cys']
P06801	Me1	AECSAEQCYK	MockWholeBrain	—	100.0	MRM	['Cys']
P07214	Sparc	LHLDYIGPCK	Cerebrum	—	100.0	MRM	['Cys']
P07214	Sparc	TFDSSCHFFATK	BrainStem	—	100.0	MRM	['Cys']
P07214	Sparc	TFDSSCHFFATK	Cerebellum	—	100.0	MRM	['Cys']
P07214	Sparc	TFDSSCHFFATK	MockWholeBrain	—	100.0	MRM	['Cys']
P07310	Ckm	FCVGLQK	BrainStem	—	100.0	MRM	['Cys']
P07310	Ckm	FCVGLQK	Cerebellum	—	100.0	MRM	['Cys']
P07310	Ckm	FCVGLQK	Cerebrum	—	100.0	MRM	['Cys']
P07356	Anxa2	STVHEILCK	BrainStem	—	100.0	MRM	['Cys']
P07724	Alb	NECFLQHK	BrainStem	—	100.0	MRM	['Cys']
P07724	Alb	NECFLQHK	Cerebrum	—	100.0	MRM	['Cys']
P08249	Mdh2	FVFSLVDAMNGK	BrainStem	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	Cerebellum	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	Cerebrum	—	100.0	MRM	['Meth']
P08249	Mdh2	GYLGPEQLPDCLK	BrainStem	—	100.0	MRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	BrainStem	—	100.0	MRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	Cerebellum	—	100.0	MRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	Cerebrum	—	100.0	MRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	MockWholeBrain	—	100.0	MRM	['Cys']
P08752	Gnai2	EIYTHFTCATDTK	BrainStem	—	100.0	MRM	['Cys']
P08752	Gnai2	EIYTHFTCATDTK	Cerebellum	—	100.0	MRM	['Cys']
P08752	Gnai2	EIYTHFTCATDTK	Cerebrum	—	100.0	MRM	['Cys']
P08752	Gnai2	LFDSICNNK	Cerebellum	—	100.0	MRM	['Cys']
P08752	Gnai2	LFDSICNNK	MockWholeBrain	—	100.0	MRM	['Cys']
P09411	Pgk1	FCLDNGAK	Cerebrum	—	100.0	MRM	['Cys']
P09411	Pgk1	FCLDNGAK	MockWholeBrain	—	100.0	MRM	['Cys']
P09411	Pgk1	GCITIIGGGDTATCCAK	BrainStem	—	100.0	MRM	['Cys']
P09411	Pgk1	GCITIIGGGDTATCCAK	Cerebellum	—	100.0	MRM	['Cys']
P09411	Pgk1	GCITIIGGGDTATCCAK	Cerebrum	—	100.0	MRM	['Cys']
P09411	Pgk1	VDFNVPMK	BrainStem	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	Cerebellum	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	Cerebrum	—	100.0	MRM	['Meth']
P11087	Col1a1	SGEYWIDPNQGCNLDAIK	Cerebellum	—	100.0	MRM	['Cys']
P11983	Tcp1	ICDDELILIK	BrainStem	—	100.0	MRM	['Cys']
P11983	Tcp1	ICDDELILIK	Cerebrum	—	100.0	MRM	['Cys']
P11983	Tcp1	ICDDELILIK	MockWholeBrain	—	100.0	MRM	['Cys']
P13595	Ncam1	FFLCQVAGDAK	BrainStem	—	100.0	MRM	['Cys']
P13595	Ncam1	FFLCQVAGDAK	Cerebrum	—	100.0	MRM	['Cys']
P13595	Ncam1	FFLCQVAGDAK	MockWholeBrain	—	100.0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	BrainStem	—	100.0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	Cerebrum	—	100.0	MRM	['Cys']
P13707	Gpd1	VCIVGSGNWGSAIAK	BrainStem	—	100.0	MRM	['Cys']
P13707	Gpd1	VCIVGSGNWGSAIAK	Cerebellum	—	100.0	MRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	BrainStem	—	100.0	MRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	Cerebellum	—	100.0	MRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	Cerebrum	—	100.0	MRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	MockWholeBrain	—	100.0	MRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	Cerebellum	—	100.0	MRM	['Cys']

SysQuan Mouse Database

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