SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P97807	Fh	SGLGELILPENEPGSSIMPGK	SalivaryGland	—	84.7	MRM	['Meth']
Q3U1B1	Gnb1	LFVSGACDASAK	BrainStem	—	84.7	MRM	['Cys']
Q64727	Vcl	EILGTCK	BoneMarrow	—	85.4	MRM	['Cys']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	Thymus	—	84.7	MRM	['Meth']
Q91VD9	Ndufs1	MCLVEIEK	Heart	—	85.1	MRM	['Meth', 'Cys']
Q91YT0	Ndufv1	EGVDWMNK	Heart	—	85.1	MRM	['Meth']
Q91ZA3	Pcca	MADEAVCVGPAPTSK	Pancreas	—	85.5	MRM	['Meth', 'Cys']
F8WGT1	Ahcyl2	LCVPAMNVNDSVTK	Cerebrum	—	83.6	MRM	['Meth', 'Cys']
P17182	Eno1	LMIEMDGTENK	Spermatozoa	—	83.5	MRM	['Meth']
Q5SWU9	Acaca	FVVMVTPEDLK	SalivaryGland	—	84.2	MRM	['Meth']
Q64737	Gart	FGDPECQVILPLLK	Pancreas	—	84.3	MRM	['Cys']
Q80SW1	Ahcyl1	QVDVVITCTGNK	lung	—	84.2	MRM	['Cys']
Q8BVI4	Qdpr	VDAILCVAGGWAGGNAK	Muscle	—	83.6	MRM	['Cys']
Q91YT0	Ndufv1	EGVDWMNK	Pancreas	—	83.8	MRM	['Meth']
Q9JLI6	Scly	NFRPGTENTPMIAGLGK	Cerebrum	—	84.2	MRM	['Meth']
Q9R1P4	Psma1	IHQIEYAMEAVK	Thyroid	—	83.8	MRM	['Meth']
P15626	Gstm2	CLDAFPNLK	LymphNodes	—	82.8	MRM	['Cys']
P21550	Eno3	SGETEDTFIADLVVGLCTGQIK	BoneMarrow	—	83.5	MRM	['Cys']
P46978	Stt3a	EGSPVLLNCLMYK	Heart	—	82.8	MRM	['Meth', 'Cys']
Q61937	Npm1	DELHIVEAEAMNYEGSPIK	BoneMarrow	—	82.8	MRM	['Meth']
Q68FL4	Ahcyl2	LCVPAMNVNDSVTK	SmallIntestines	—	83.1	MRM	['Meth', 'Cys']
Q91WG8	Gne	ILLAGCPSYDK	SalivaryGland	—	82.9	MRM	['Cys']
Q99LB2	Dhrs4	AVVPEMEK	Heart	—	83.3	MRM	['Meth']
Q99MR8	Mccc1	IGYPVMIK	Muscle	—	82.5	MRM	['Meth']
Q9DAU1	Cnpy3	LIEVTETICK	Cerebrum	—	83.2	MRM	['Cys']
Q9R1P4	Psma1	IHQIEYAMEAVK	BoneMarrow	—	82.6	MRM	['Meth']
P07724	Alb	NECFLQHK	Heart	—	81.9	MRM	['Cys']
P15105	Glul	TCLLNETGDEPFQYK	Spermatozoa	—	81.8	MRM	['Cys']
P47738	Aldh2	LGPALATGNVVVMK	plasma	—	82.3	MRM	['Meth']
P47740	Aldh3a2	IVMEAAAK	SalivaryGland	—	82.5	MRM	['Meth']
P50431	Shmt1	VLEACSIACNK	Thymus	—	82.0	MRM	['Cys']
P54869	Hmgcs2	PTGGAGAVAMLIGPK	Cerebrum	—	82.0	MRM	['Meth']
P58252	Eef2	STLTDSLVCK	BrainStem	—	82.5	MRM	['Cys']
P99024	Tubb5	EVDEQMLNVQNK	Cerebrum	—	82.3	MRM	['Meth']
Q80SW1	Ahcyl1	QVDVVITCTGNK	Pancreas	—	82.4	MRM	['Cys']
Q922D8	Mthfd1	QGFGNLPICMAK	lung	—	82.3	MRM	['Meth', 'Cys']
Q9R1P1	Psmb3	FGIQAQMVTTDFQK	Spleen	—	82.0	MRM	['Meth']
Q9R1P4	Psma1	IHQIEYAMEAVK	Muscle	—	82.4	MRM	['Meth']
A0A7P0A156	Nadk2	SSGLNLCTGTGSK	lung	—	81.4	MRM	['Cys']
P46978	Stt3a	EGSPVLLNCLMYK	liver	—	80.8	MRM	['Meth', 'Cys']
P50431	Shmt1	VLEACSIACNK	BoneMarrow	—	81.0	MRM	['Cys']
P61161	Actr2	ILLTEPPMNPTK	liver	—	80.8	MRM	['Meth']
Q80SW1	Ahcyl1	QVDVVITCTGNK	liver	—	81.1	MRM	['Cys']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	BrainStem	—	81.1	MRM	['Meth']
Q91VD9	Ndufs1	MCLVEIEK	kidney	—	81.1	MRM	['Meth', 'Cys']
Q9JK38	Gnpnat1	ITLECLPQNVGFYK	lung	—	80.8	MRM	['Cys']
P17182	Eno1	LMIEMDGTENK	Thymus	—	80.1	MRM	['Meth']
P46978	Stt3a	EGSPVLLNCLMYK	BrainStem	—	80.3	MRM	['Meth', 'Cys']
Q8BMF4	Dlat	YLEKPITMLL	Thymus	—	80.2	MRM	['Meth']
Q9D6J6	Ndufv2	QNGWLPISAMNK	BoneMarrow	—	79.7	MRM	['Meth']

SysQuan Mouse Database

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