SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
Q61490	Alcam	TIICHVEGFPK	kidney	—	92.7	0	MRM	['Cys']
Q61937	Npm1	DELHIVEAEAMNYEGSPIK	liver	—	93.5	0	MRM	['Meth']
Q8K0E8	Fgb	MGPTELLIEMEDWK	Spermatozoa	—	93.3	0	MRM	['Meth']
Q8VDD5	Myh9	IIGLDQVAGMSETALPGAFK	Spermatozoa	—	92.6	0	MRM	['Meth']
Q91VD9	Ndufs1	GNDMQVGTYIEK	kidney	—	92.7	0	MRM	['Meth']
Q91WK5	Gcsh	SCYEDGWLIK	Pancreas	—	92.6	0	MRM	['Cys']
Q91YT0	Ndufv1	EGVDWMNK	SalivaryGland	—	93.3	0	MRM	['Meth']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	BoneMarrow	—	93.1	0	MRM	['Cys']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	BrainStem	—	92.6	0	MRM	['Cys']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	Cerebellum	—	92.8	0	MRM	['Cys']
Q922D8	Mthfd1	QGFGNLPICMAK	Thyroid	—	93.3	0	MRM	['Meth', 'Cys']
Q99JY0	Hadhb	AGLTMNDIDAFEFHEAFSGQILANFK	Thyroid	—	93.5	0	MRM	['Meth']
Q9CQA3	Sdhb	CGPMVLDALIK	Muscle	—	92.7	0	MRM	['Meth', 'Cys']
Q9CQA3	Sdhb	CGPMVLDALIK	SmallIntestines	—	92.8	0	MRM	['Meth', 'Cys']
Q9CQA3	Sdhb	CGPMVLDALIK	Spermatozoa	—	93.4	0	MRM	['Meth', 'Cys']
Q9DCJ9	Npl	TNQMLEAFEQK	Thymus	—	93.2	0	MRM	['Meth']
Q9R0P3	Esd	CPALYWLSGLTCTEQNFISK	Pancreas	—	92.9	0	MRM	['Cys']
Q9R1P3	Psmb2	VAASNIVQMK	Muscle	—	93.5	0	MRM	['Meth']
Q9R1P3	Psmb2	VAASNIVQMK	SmallIntestines	—	93.1	0	MRM	['Meth']
Q9WUB3	Pygm	AAPGYHMAK	Thyroid	—	92.7	0	MRM	['Meth']
Q9Z1J3	Nfs1	IPLDVNDMK	Thyroid	—	93.2	0	MRM	['Meth']
Q9Z2C5	Mtm1	GENSYGLDITCK	Heart	—	93.3	0	MRM	['Cys']
Q9Z2I9	Sucla2	CDVIAQGIVMAVK	SalivaryGland	—	92.7	0	MRM	['Meth', 'Cys']
P56480	Atp5f1b	TREGNDLYHEMIESGVINLK	Spermatozoa	—	92.9	1	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	Pancreas	—	91.9	0	MRM	['Meth']
A0A668KL51	Idh3b	HLNLEYHSSMIADAVK	SmallIntestines	—	92.4	0	MRM	['Meth']
E9Q1Q9	Khk	FGCQVAGK	SmallIntestines	—	91.8	0	MRM	['Cys']
P05064	Aldoa	ALANSLACQGK	Cerebellum	—	91.9	0	MRM	['Cys']
P06745	Gpi	FAAYFQQGDMESNGK	BrainStem	—	92.2	0	MRM	['Meth']
P08249	Mdh2	GYLGPEQLPDCLK	Spermatozoa	—	91.8	0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	Thymus	—	92.1	0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	Thyroid	—	92.2	0	MRM	['Cys']
P17182	Eno1	LMIEMDGTENK	Spleen	—	91.5	0	MRM	['Meth']
P17182	Eno1	SGETEDTFIADLVVGLCTGQIK	SmallIntestines	—	92.5	0	MRM	['Cys']
P17182	Eno1	VNQIGSVTESLQACK	BrainStem	—	91.7	0	MRM	['Cys']
P40124	Cap1	INSITVDNCK	Thymus	—	92.0	0	MRM	['Cys']
P51174	Acadl	VQPIYGGTNEIMK	Pancreas	—	91.8	0	MRM	['Meth']
P61922	Abat	GVVLGGCGDK	BrainStem	—	92.0	0	MRM	['Cys']
P61922	Abat	GVVLGGCGDK	Cerebrum	—	91.8	0	MRM	['Cys']
Q711T7	Nadsyn1	YDCSSADINPIGGISK	Cerebellum	—	92.1	0	MRM	['Cys']
Q80SW1	Ahcyl1	QVDVVITCTGNK	Thymus	—	92.5	0	MRM	['Cys']
Q8BVI4	Qdpr	GAVHQLCQSLAGK	SmallIntestines	—	92.0	0	MRM	['Cys']
Q8BW75	Maob	ICELYAK	Cerebrum	—	92.2	0	MRM	['Cys']
Q8K0E8	Fgb	HGTDDGVVWMNWK	BoneMarrow	—	91.9	0	MRM	['Meth']
Q91ZA3	Pcca	VDSGIQPGSDISIYYDPMISK	Cerebrum	—	91.7	0	MRM	['Meth']
Q922D8	Mthfd1	QGFGNLPICMAK	liver	—	92.5	0	MRM	['Meth', 'Cys']
Q922D8	Mthfd1	QGFGNLPICMAK	SmallIntestines	—	91.5	0	MRM	['Meth', 'Cys']
Q99MQ4	Aspn	VGVNDFCPTVPK	liver	—	92.4	0	MRM	['Cys']
Q99MR8	Mccc1	IGYPVMIK	Thymus	—	92.4	0	MRM	['Meth']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	kidney	—	91.8	0	MRM	['Meth', 'Cys']

SysQuan Mouse Database

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