SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P63330	Ppp2ca	ELDQWIEQLNECK	Thyroid	—	94.3	MRM	['Cys']
Q32M04	Prps1l1	NCTIVSPDAGGAK	Spermatozoa	—	94.3	MRM	['Cys']
Q3UW64	Gne	ILLAGCPSYDK	SalivaryGland	—	94.5	MRM	['Cys']
Q3V117	Acly	VDATADYICK	Thymus	—	94.4	MRM	['Cys']
Q5SWU9	Acaca	FVVMVTPEDLK	Cerebrum	—	94.3	MRM	['Meth']
Q5SWU9	Acaca	FVVMVTPEDLK	liver	—	94.0	MRM	['Meth']
Q60864	Stip1	LILEQMQK	BoneMarrow	—	93.9	MRM	['Meth']
Q62465	Vat1	CLVLTGFGGYDK	Pancreas	—	94.1	MRM	['Cys']
Q68FL4	Ahcyl2	LCVPAMNVNDSVTK	Pancreas	—	94.4	MRM	['Meth', 'Cys']
Q80SW1	Ahcyl1	LCVPAMNVNDSVTK	liver	—	94.2	MRM	['Meth', 'Cys']
Q80SW1	Ahcyl1	LCVPAMNVNDSVTK	SalivaryGland	—	93.8	MRM	['Meth', 'Cys']
Q80SW1	Ahcyl1	LCVPAMNVNDSVTK	Thymus	—	93.5	MRM	['Meth', 'Cys']
Q8BMF4	Dlat	YLEKPITMLL	Spermatozoa	—	94.0	MRM	['Meth']
Q8C5H8	Nadk2	SSGLNLCTGTGSK	Cerebrum	—	94.1	MRM	['Cys']
Q8VDD5	Myh9	IIGLDQVAGMSETALPGAFK	Pancreas	—	93.9	MRM	['Meth']
Q91V41	Rab14	SCLLHQFTEK	Cerebrum	—	94.4	MRM	['Cys']
Q91V92	Acly	VDATADYICK	SmallIntestines	—	94.5	MRM	['Cys']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	Spermatozoa	—	93.8	MRM	['Meth']
Q91YI0	Asl	FVGAVDPIMEK	Cerebellum	—	94.0	MRM	['Meth']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	LymphNodes	—	94.3	MRM	['Cys']
Q91ZA3	Pcca	MADEAVCVGPAPTSK	Muscle	—	94.1	MRM	['Meth', 'Cys']
Q922D8	Mthfd1	QGFGNLPICMAK	Thymus	—	94.4	MRM	['Meth', 'Cys']
Q99JY0	Hadhb	AGLTMNDIDAFEFHEAFSGQILANFK	BoneMarrow	—	94.4	MRM	['Meth']
Q99JY0	Hadhb	AGLTMNDIDAFEFHEAFSGQILANFK	SalivaryGland	—	93.8	MRM	['Meth']
Q99LB2	Dhrs4	VNCLAPGLIK	Thymus	—	94.0	MRM	['Cys']
Q99MQ4	Aspn	VGVNDFCPTVPK	Heart	—	94.5	MRM	['Cys']
Q99MR8	Mccc1	IGYPVMIK	LymphNodes	—	94.3	MRM	['Meth']
Q9DCJ9	Npl	TNQMLEAFEQK	kidney	—	94.1	MRM	['Meth']
Q9JK38	Gnpnat1	ITLECLPQNVGFYK	SmallIntestines	—	93.6	MRM	['Cys']
Q9R1P4	Psma1	IHQIEYAMEAVK	liver	—	94.2	MRM	['Meth']
Q9R1P4	Psma1	IHQIEYAMEAVK	LymphNodes	—	94.0	MRM	['Meth']
Q9Z1Q5	Clic1	LHIVQVVCK	LymphNodes	—	94.0	MRM	['Cys']
Q9Z1Q5	Clic1	LHIVQVVCK	Thyroid	—	94.1	MRM	['Cys']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	Spermatozoa	—	93.3	MRM	['Meth']
E9Q3Q6	Alcam	TIICHVEGFPK	Cerebellum	—	92.9	MRM	['Cys']
P07356	Anxa2	STVHEILCK	LymphNodes	—	93.5	MRM	['Cys']
P17182	Eno1	SGETEDTFIADLVVGLCTGQIK	LymphNodes	—	93.2	MRM	['Cys']
P17182	Eno1	SGETEDTFIADLVVGLCTGQIK	SalivaryGland	—	93.2	MRM	['Cys']
P17751	Tpi1	IAVAAQNCYK	BrainStem	—	93.5	MRM	['Cys']
P26039	Tln1	QVAASTAQLLVACK	LymphNodes	—	93.2	MRM	['Cys']
P26041	Msn	AQMVQEDLEK	SmallIntestines	—	92.8	MRM	['Meth']
P46978	Stt3a	EGSPVLLNCLMYK	lung	—	93.0	MRM	['Meth', 'Cys']
P46978	Stt3a	EGSPVLLNCLMYK	Spermatozoa	—	93.4	MRM	['Meth', 'Cys']
P61161	Actr2	ILLTEPPMNPTK	SmallIntestines	—	92.9	MRM	['Meth']
P62874	Gnb1	LFVSGACDASAK	Thymus	—	93.3	MRM	['Cys']
P62874	Gnb1	LFVSGACDASAK	Thyroid	—	92.9	MRM	['Cys']
P63323	Rps12	LVEALCAEHQINLIK	BrainStem	—	93.5	MRM	['Cys']
P97807	Fh	SGLGELILPENEPGSSIMPGK	LymphNodes	—	93.4	MRM	['Meth']
Q07079	Igfbp5	ALSMCPPSPLGCELVK	lung	—	93.0	MRM	['Meth', 'Cys']
Q5SWU9	Acaca	FVVMVTPEDLK	LymphNodes	—	92.6	MRM	['Meth']

SysQuan Mouse Database

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