SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
Q9Z1Q5	Clic1	LHIVQVVCK	kidney	—	97.3	0	MRM	['Cys']
Q9Z2I9	Sucla2	CDVIAQGIVMAVK	Spermatozoa	—	96.8	0	MRM	['Meth', 'Cys']
P56480	Atp5f1b	TREGNDLYHEMIESGVINLK	Thyroid	—	97.4	1	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	Cerebrum	—	96.1	0	MRM	['Meth']
A0A7P0A156	Nadk2	SSGLNLCTGTGSK	Cerebellum	—	95.9	0	MRM	['Cys']
A0A7P0A156	Nadk2	SSGLNLCTGTGSK	Heart	—	95.9	0	MRM	['Cys']
D3YWR7	Qdpr	GAVHQLCQSLAGK	LymphNodes	—	95.9	0	MRM	['Cys']
O88986	Gcat	GTDELLGVMDQVTIINSTLGK	kidney	—	96.1	0	MRM	['Meth']
P04117	Fabp4	LVSSENFDDYMK	SalivaryGland	—	96.4	0	MRM	['Meth']
P04117	Fabp4	LVSSENFDDYMK	Thyroid	—	96.3	0	MRM	['Meth']
P05202	Got2	EYLPIGGLAEFCK	BrainStem	—	96.1	0	MRM	['Cys']
P05202	Got2	EYLPIGGLAEFCK	Heart	—	96.0	0	MRM	['Cys']
P05202	Got2	EYLPIGGLAEFCK	Spleen	—	96.1	0	MRM	['Cys']
P07356	Anxa2	STVHEILCK	Cerebrum	—	96.2	0	MRM	['Cys']
P07356	Anxa2	STVHEILCK	SmallIntestines	—	96.0	0	MRM	['Cys']
P07356	Anxa2	STVHEILCK	Thymus	—	96.3	0	MRM	['Cys']
P08249	Mdh2	GYLGPEQLPDCLK	BoneMarrow	—	96.4	0	MRM	['Cys']
P08249	Mdh2	GYLGPEQLPDCLK	liver	—	96.0	0	MRM	['Cys']
P08249	Mdh2	GYLGPEQLPDCLK	Muscle	—	96.4	0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	Muscle	—	95.7	0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	SmallIntestines	—	95.8	0	MRM	['Cys']
P15105	Glul	TCLLNETGDEPFQYK	BrainStem	—	96.0	0	MRM	['Cys']
P15105	Glul	TCLLNETGDEPFQYK	Spleen	—	95.9	0	MRM	['Cys']
P15626	Gstm2	CLDAFPNLK	Spermatozoa	—	96.0	0	MRM	['Cys']
P17182	Eno1	SGETEDTFIADLVVGLCTGQIK	Thyroid	—	96.3	0	MRM	['Cys']
P21550	Eno3	VNQIGSVTESLQACK	BoneMarrow	—	96.0	0	MRM	['Cys']
P26039	Tln1	AAMEPIVISAK	Cerebrum	—	95.8	0	MRM	['Meth']
P26039	Tln1	AAMEPIVISAK	SalivaryGland	—	95.5	0	MRM	['Meth']
P26039	Tln1	QVAASTAQLLVACK	Muscle	—	95.6	0	MRM	['Cys']
P26039	Tln1	QVAASTAQLLVACK	Spleen	—	95.5	0	MRM	['Cys']
P26041	Msn	AQMVQEDLEK	Thyroid	—	96.1	0	MRM	['Meth']
P28474	Adh5	AGDTVIPLYIPQCGECK	Cerebrum	—	96.3	0	MRM	['Cys']
P28474	Adh5	AGDTVIPLYIPQCGECK	Thymus	—	96.1	0	MRM	['Cys']
P38060	Hmgcl	GYVSCALGCPYEGK	BrainStem	—	95.8	0	MRM	['Cys']
P38060	Hmgcl	GYVSCALGCPYEGK	SmallIntestines	—	95.9	0	MRM	['Cys']
P47738	Aldh2	LGPALATGNVVVMK	SmallIntestines	—	96.3	0	MRM	['Meth']
P50431	Shmt1	IMGLDLPDGGHLTHGFMTDK	SmallIntestines	—	95.7	0	MRM	['Meth']
P50431	Shmt1	ISATSIFFESMPYK	liver	—	95.6	0	MRM	['Meth']
P50431	Shmt1	VLEACSIACNK	kidney	—	96.3	0	MRM	['Cys']
P54071	Idh2	SSGGFVWACK	SmallIntestines	—	95.9	0	MRM	['Cys']
P54071	Idh2	SSGGFVWACK	Thyroid	—	96.0	0	MRM	['Cys']
P56480	Atp5f1b	FLSQPFQVAEVFTGHMGK	Cerebrum	—	96.2	0	MRM	['Meth']
P57780	Actn4	MVSDINNGWQHLEQAEK	Spleen	—	96.1	0	MRM	['Meth']
P61161	Actr2	ILLTEPPMNPTK	BoneMarrow	—	95.8	0	MRM	['Meth']
P62874	Gnb1	LFVSGACDASAK	TailSkin	—	95.7	0	MRM	['Cys']
P63001	Rac1	AVLCPPPVK	BrainStem	—	96.2	0	MRM	['Cys']
P63330	Ppp2ca	ELDQWIEQLNECK	BoneMarrow	—	95.8	0	MRM	['Cys']
P63330	Ppp2ca	ELDQWIEQLNECK	Heart	—	96.2	0	MRM	['Cys']
P99024	Tubb5	EVDEQMLNVQNK	BoneMarrow	—	95.5	0	MRM	['Meth']
Q3UDC8	Eef2	STLTDSLVCK	liver	—	95.5	0	MRM	['Cys']

SysQuan Mouse Database

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