SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P53395	Dbt	LSFMPFFLK	BrainStem	—	97.0	MRM	['Meth']
P54071	Idh2	DLAGCIHGLSNVK	BoneMarrow	—	97.4	MRM	['Cys']
P54071	Idh2	DLAGCIHGLSNVK	SalivaryGland	—	96.7	MRM	['Cys']
P54071	Idh2	DLAGCIHGLSNVK	Thymus	—	97.3	MRM	['Cys']
P56480	Atp5f1b	FLSQPFQVAEVFTGHMGK	BrainStem	—	97.2	MRM	['Meth']
P56480	Atp5f1b	FLSQPFQVAEVFTGHMGK	SalivaryGland	—	97.0	MRM	['Meth']
P57780	Actn4	MVSDINNGWQHLEQAEK	Cerebrum	—	97.4	MRM	['Meth']
P57780	Actn4	MVSDINNGWQHLEQAEK	SmallIntestines	—	97.3	MRM	['Meth']
P58252	Eef2	STLTDSLVCK	BoneMarrow	—	96.7	MRM	['Cys']
P58252	Eef2	STLTDSLVCK	Cerebellum	—	96.5	MRM	['Cys']
P58252	Eef2	STLTDSLVCK	LymphNodes	—	97.5	MRM	['Cys']
P58252	Eef2	STLTDSLVCK	Pancreas	—	97.3	MRM	['Cys']
P58252	Eef2	STLTDSLVCK	SmallIntestines	—	96.6	MRM	['Cys']
P61922	Abat	GVVLGGCGDK	Cerebellum	—	97.5	MRM	['Cys']
P62874	Gnb1	LFVSGACDASAK	kidney	—	97.0	MRM	['Cys']
P62874	Gnb1	LFVSGACDASAK	Pancreas	—	97.1	MRM	['Cys']
P63242	Eif5a	IVEMSTSK	BoneMarrow	—	97.0	MRM	['Meth']
P63242	Eif5a	IVEMSTSK	SmallIntestines	—	97.4	MRM	['Meth']
P63330	Ppp2ca	ELDQWIEQLNECK	BrainStem	—	97.1	MRM	['Cys']
P63330	Ppp2ca	ELDQWIEQLNECK	liver	—	96.7	MRM	['Cys']
P63330	Ppp2ca	ELDQWIEQLNECK	SmallIntestines	—	97.3	MRM	['Cys']
P68372	Tubb4b	EVDEQMLNVQNK	Spermatozoa	—	96.6	MRM	['Meth']
P70404	Idh3g	HTVTMIPGDGIGPELMLHVK	kidney	—	97.4	MRM	['Meth']
P97351	Rps3a	LFCVGFTK	Thyroid	—	97.0	MRM	['Cys']
Q3TSA8	Scamp1	AQQEFATGVMSNK	Spermatozoa	—	97.2	MRM	['Meth']
Q3UIB5	Dhrs4	AVVPEMEK	Cerebellum	—	97.0	MRM	['Meth']
Q3UIB5	Dhrs4	VNCLAPGLIK	Cerebellum	—	97.4	MRM	['Cys']
Q3UNX5	Acsm3	TATPQNFSNYESMK	kidney	—	96.9	MRM	['Meth']
Q3V117	Acly	VDATADYICK	kidney	—	96.8	MRM	['Cys']
Q3V117	Acly	VDATADYICK	lung	—	97.0	MRM	['Cys']
Q3V117	Acly	VDATADYICK	LymphNodes	—	97.4	MRM	['Cys']
Q3V117	Acly	VDATADYICK	SalivaryGland	—	97.0	MRM	['Cys']
Q60864	Stip1	LILEQMQK	BrainStem	—	97.4	MRM	['Meth']
Q62465	Vat1	CLVLTGFGGYDK	BoneMarrow	—	96.8	MRM	['Cys']
Q62465	Vat1	CLVLTGFGGYDK	Cerebrum	—	96.5	MRM	['Cys']
Q64727	Vcl	EILGTCK	lung	—	96.6	MRM	['Cys']
Q64737	Gart	FGDPECQVILPLLK	kidney	—	96.5	MRM	['Cys']
Q6TEK5	Vkorc1l1	ALCDLGPWVK	BoneMarrow	—	96.5	MRM	['Cys']
Q791V5	Mtch2	LCSGVLGTVVHGK	LymphNodes	—	97.5	MRM	['Cys']
Q7TPR4	Actn1	MLDAEDIVGTARPDEK	SalivaryGland	—	97.2	MRM	['Meth']
Q80XN0	Bdh1	GFLVFAGCLMK	kidney	—	97.2	MRM	['Meth', 'Cys']
Q80XN0	Bdh1	GFLVFAGCLMK	SmallIntestines	—	96.6	MRM	['Meth', 'Cys']
Q80XN0	Bdh1	SPYCITK	kidney	—	96.7	MRM	['Cys']
Q8BVI4	Qdpr	VDAILCVAGGWAGGNAK	Cerebrum	—	97.4	MRM	['Cys']
Q8C196	Cps1	TSACFEPSLDYMVTK	SmallIntestines	—	97.4	MRM	['Meth', 'Cys']
Q8CHR6	Dpyd	AVPEEMELAK	liver	—	96.8	MRM	['Meth']
Q8K021	Scamp1	AQQEFATGVMSNK	Cerebellum	—	97.2	MRM	['Meth']
Q8K0E8	Fgb	MGPTELLIEMEDWK	SalivaryGland	—	97.1	MRM	['Meth']
Q8K3J1	Ndufs8	YDIDMTK	Cerebrum	—	97.4	MRM	['Meth']
Q8K3J1	Ndufs8	YDIDMTK	LymphNodes	—	97.0	MRM	['Meth']

SysQuan Mouse Database

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