SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q8C196	Cps1	TVLMNPNIASVQTNEVGLK	liver	—	98.7	MRM	['Meth']
Q8CGC7	Eprs1	AYVDDTPAEQMK	lung	—	99.2	MRM	['Meth']
Q8K0E8	Fgb	MGPTELLIEMEDWK	BoneMarrow	—	98.5	MRM	['Meth']
Q8K3J1	Ndufs8	YDIDMTK	kidney	—	98.5	MRM	['Meth']
Q91VA7	Idh3b	DMGGYSTTTDFIK	liver	—	99.4	MRM	['Meth']
Q91VA7	Idh3b	DMGGYSTTTDFIK	LymphNodes	—	98.7	MRM	['Meth']
Q91VD9	Ndufs1	GNDMQVGTYIEK	Muscle	—	99.1	MRM	['Meth']
Q91VD9	Ndufs1	MCLVEIEK	Muscle	—	99.0	MRM	['Meth', 'Cys']
Q91VD9	Ndufs1	MCLVEIEK	Thyroid	—	98.6	MRM	['Meth', 'Cys']
Q91WK5	Gcsh	SCYEDGWLIK	liver	—	98.6	MRM	['Cys']
Q91X83	Mat1a	VACETVCK	liver	—	99.3	MRM	['Cys']
Q91YT0	Ndufv1	EGVDWMNK	Cerebellum	—	98.9	MRM	['Meth']
Q91YT0	Ndufv1	EGVDWMNK	Cerebrum	—	98.8	MRM	['Meth']
Q91YT0	Ndufv1	EGVDWMNK	liver	—	98.5	MRM	['Meth']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	Spleen	—	98.7	MRM	['Cys']
Q91ZA3	Pcca	EIGYPVMIK	LymphNodes	—	99.1	MRM	['Meth']
Q91ZA3	Pcca	EIGYPVMIK	Pancreas	—	99.3	MRM	['Meth']
Q91ZA3	Pcca	MADEAVCVGPAPTSK	Cerebrum	—	99.0	MRM	['Meth', 'Cys']
Q91ZA3	Pcca	MADEAVCVGPAPTSK	kidney	—	98.6	MRM	['Meth', 'Cys']
Q91ZA3	Pcca	VDSGIQPGSDISIYYDPMISK	Thyroid	—	99.1	MRM	['Meth']
Q93092	Taldo1	WLHNEDQMAVEK	SalivaryGland	—	98.6	MRM	['Meth']
Q93092	Taldo1	WLHNEDQMAVEK	Thymus	—	98.8	MRM	['Meth']
Q99JY0	Hadhb	AGLTMNDIDAFEFHEAFSGQILANFK	Muscle	—	98.7	MRM	['Meth']
Q99KI0	Aco2	CTTDHISAAGPWLK	Thymus	—	99.0	MRM	['Cys']
Q99KI0	Aco2	VAVPSTIHCDHLIEAQVGGEK	BoneMarrow	—	99.0	MRM	['Cys']
Q99KI0	Aco2	VAVPSTIHCDHLIEAQVGGEK	LymphNodes	—	98.9	MRM	['Cys']
Q99KI0	Aco2	VAVPSTIHCDHLIEAQVGGEK	Pancreas	—	98.5	MRM	['Cys']
Q99LB2	Dhrs4	VNCLAPGLIK	kidney	—	98.6	MRM	['Cys']
Q99MR8	Mccc1	IGYPVMIK	Heart	—	98.5	MRM	['Meth']
Q99MR8	Mccc1	IGYPVMIK	lung	—	99.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	liver	—	99.0	MRM	['Meth']
Q9D0F9	Pgm1	IDAMHGVVGPYVK	Heart	—	98.5	MRM	['Meth']
Q9D6J6	Ndufv2	QNGWLPISAMNK	Cerebellum	—	98.7	MRM	['Meth']
Q9D6J6	Ndufv2	QNGWLPISAMNK	Cerebrum	—	98.5	MRM	['Meth']
Q9DCL9	Paics	VVVLMGSTSDLGHCEK	Muscle	—	99.4	MRM	['Meth', 'Cys']
Q9EQF5	Dpys	MSVIWEK	kidney	—	98.8	MRM	['Meth']
Q9ET01	Pygl	INPSSMFDVHVK	BoneMarrow	—	99.4	MRM	['Meth']
Q9ET01	Pygl	INPSSMFDVHVK	kidney	—	99.2	MRM	['Meth']
Q9ET01	Pygl	INPSSMFDVHVK	LymphNodes	—	99.1	MRM	['Meth']
Q9R0P3	Esd	CFGGLQK	lung	—	99.1	MRM	['Cys']
Q9R0P3	Esd	CPALYWLSGLTCTEQNFISK	Cerebellum	—	99.0	MRM	['Cys']
Q9R0P3	Esd	CPALYWLSGLTCTEQNFISK	Heart	—	99.5	MRM	['Cys']
Q9R0P3	Esd	CPALYWLSGLTCTEQNFISK	SmallIntestines	—	98.5	MRM	['Cys']
Q9R0Q7	Ptges3	LTFSCLGGSDNFK	lung	—	98.5	MRM	['Cys']
Q9R1P3	Psmb2	VAASNIVQMK	liver	—	99.1	MRM	['Meth']
Q9R1P3	Psmb2	VAASNIVQMK	lung	—	98.8	MRM	['Meth']
Q9WUM5	Suclg1	ISALQSAGVVVSMSPAQLGTTIYK	Thyroid	—	98.8	MRM	['Meth']
Q9WUM5	Suclg1	MGHAGAIIAGGK	Heart	—	98.8	MRM	['Meth']
Q9WVJ9	Efemp2	DVNECLTIPEACK	lung	—	99.3	MRM	['Cys']
Q9Z2C5	Mtm1	GENSYGLDITCK	lung	—	99.0	MRM	['Cys']

SysQuan Mouse Database

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