SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q99PH4	Aldh3a2	IVMEAAAK	Cerebrum	—	100.0	MRM	['Meth']
Q99PH4	Aldh3a2	IVMEAAAK	kidney	—	100.0	MRM	['Meth']
Q99PH4	Aldh3a2	IVMEAAAK	lung	—	100.0	MRM	['Meth']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	BoneMarrow	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	BrainStem	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	Cerebellum	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	Heart	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	kidney	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	liver	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	LymphNodes	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	Muscle	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	plasma	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	SalivaryGland	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	TailSkin	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	Thymus	—	100.0	MRM	['Meth', 'Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	Thyroid	—	100.0	MRM	['Meth', 'Cys']
Q9CQA3	Sdhb	CGPMVLDALIK	kidney	—	100.0	MRM	['Meth', 'Cys']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	BoneMarrow	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	BrainStem	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	Cerebellum	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	Cerebrum	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	Heart	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	kidney	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	liver	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	lung	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	LymphNodes	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	Muscle	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	Pancreas	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	SalivaryGland	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	Spleen	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	Thymus	—	100.0	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	Thyroid	—	100.0	MRM	['Meth']
Q9CV53	Gcsh	SCYEDGWLIK	Cerebrum	—	100.0	MRM	['Cys']
Q9CV53	Gcsh	SCYEDGWLIK	Heart	—	100.0	MRM	['Cys']
Q9CV53	Gcsh	SCYEDGWLIK	liver	—	100.0	MRM	['Cys']
Q9CV53	Gcsh	SCYEDGWLIK	lung	—	100.0	MRM	['Cys']
Q9CWF2	Tubb2b	EVDEQMLNVQNK	Cerebrum	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	BoneMarrow	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	BrainStem	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	Cerebellum	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	Cerebrum	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	Heart	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	kidney	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	liver	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	LymphNodes	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	SmallIntestines	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	Spleen	—	100.0	MRM	['Meth']
Q9CWK8	Snx2	MNESDAWFEEK	Thymus	—	100.0	MRM	['Meth']
Q9CZN7	Shmt2	ISATSIFFESMPYK	Cerebrum	—	100.0	MRM	['Meth']
Q9CZN7	Shmt2	ISATSIFFESMPYK	kidney	—	100.0	MRM	['Meth']

SysQuan Mouse Database

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