| Uniprot ID | Gene | Peptide Sequence | Tissue | Mouse Conc. (fmol/μg) | Incorp. (%) | Missed Cleav. | Assays Available | PTM | |
|---|---|---|---|---|---|---|---|---|---|
| Q8K3J1 | Ndufs8 | EPATINYPFEK | MockWholeBrain | — | 67.2 | 0 | MRM | — | |
| Q7TSV4 | Pgm2 | EGFHFEETLTGFK | Cerebellum | — | 67.0 | 0 | MRM | — | |
| P16460 | Ass1 | NQAPPGLYTK | Cerebellum | — | 67.0 | 0 | MRM | — | |
| Q91VB8 | Hba-a1 | VDPVNFK | Cerebellum | — | 66.9 | 0 | MRM | — | |
| Q9DBH5 | Lman2 | LVPGPVFGSK | Cerebrum | — | 66.1 | 0 | MRM | — | |
| P11499 | Hsp90ab1 | EGLELPEDEEEK | Cerebellum | — | 66.0 | 0 | MRM | — | |
| Q9Z2X1 | Hnrnpf | ITGEAFVQFASQELAEK | MockWholeBrain | — | 65.9 | 0 | MRM | — | |
| Q922B2 | Dars1 | NNAYLAQSPQLYK | Cerebellum | — | 65.8 | 0 | MRM | — | |
| Q8R0Y6 | Aldh1l1 | FAELTLK | MockWholeBrain | — | 65.6 | 0 | MRM | — | |
| Q9D051 | Pdhb | VVSPWNSEDAK | MockWholeBrain | — | 65.3 | 0 | MRM | — | |
| O55042 | Snca | EQVTNVGGAVVTGVTAVAQK | MockWholeBrain | — | 65.2 | 0 | MRM | — | |
| Q60930 | Vdac2 | YQLDPTASISAK | MockWholeBrain | — | 65.2 | 0 | MRM | — | |
| P62960 | Ybx1 | EDVFVHQTAIK | MockWholeBrain | — | 64.6 | 0 | MRM | — | |
| P00329 | Adh1 | GAIFGGFK | MockWholeBrain | — | 64.0 | 0 | MRM | — | |
| O09167 | Rpl21 | GTWVQLK | Cerebellum | — | 63.7 | 0 | MRM | — | |
| Q9CWS5 | — | FLASVSTVLTSK | BrainStem | — | 63.6 | 0 | MRM | — | |
| D3Z6F5 | Atp5f1a | VVDALGNAIDGK | Cerebellum | — | 63.1 | 0 | MRM | — | |
| Q3TDD9 | Ppp1r21 | EGLAQQVQQSLEK | Cerebellum | — | 63.0 | 0 | MRM | — | |
| Q8K135 | Kiaa0319l | ELTLPVDSTTLDGSK | BrainStem | — | 62.1 | 0 | MRM | — | |
| P19096 | Fasn | VLEALLPLK | MockWholeBrain | — | 61.9 | 0 | MRM | — | |
| Q93092 | Taldo1 | LSSTWEGIQAGK | MockWholeBrain | — | 61.6 | 0 | MRM | — | |
| P47754 | Capza2 | DIQDSLTVSNEVQTAK | Cerebellum | — | 61.3 | 0 | MRM | — | |
| G3UX26 | Vdac2 | YQLDPTASISAK | Cerebellum | — | 60.8 | 0 | MRM | — | |
| Q9WUM5 | Suclg1 | LVGGTTPGK | MockWholeBrain | — | 60.7 | 0 | MRM | — | |
| P19096 | Fasn | GVDLVLNSLAEEK | MockWholeBrain | — | 58.5 | 0 | MRM | — | |
| P45952 | Acadm | NTYYASIAK | BrainStem | — | 57.4 | 0 | MRM | — | |
| P45952 | Acadm | NTYYASIAK | Cerebrum | — | 57.1 | 0 | MRM | — | |
| P51885 | Lum | NNQIDHIDEK | BrainStem | — | 56.8 | 0 | MRM | — | |
| Q61586 | Gpam | LIANLAEHILFTASK | BrainStem | — | 56.4 | 0 | MRM | — | |
| P06745 | Gpi | TFTTQETITNAETAK | MockWholeBrain | — | 56.4 | 0 | MRM | — | |
| Q9CWS0 | Ddah1 | TPEEYPESAK | BrainStem | — | 56.1 | 0 | MRM | — | |
| Q91YT0 | Ndufv1 | GGAGFPTGLK | Cerebellum | — | 56.0 | 0 | MRM | — | |
| Q62422 | Ostf1 | LGDTALHAAAWK | MockWholeBrain | — | 56.0 | 0 | MRM | — | |
| A0A0A6YX18 | Atp6v1h | LGESVQDLSSFDEYSSELK | Cerebrum | — | 55.2 | 0 | MRM | — | |
| Q8BMF4 | Dlat | GIDLTQVK | MockWholeBrain | — | 55.0 | 0 | MRM | — | |
| Q9WVK4 | Ehd1 | ELVNNLGEIYQK | MockWholeBrain | — | 54.6 | 0 | MRM | — | |
| Q99K85 | Psat1 | QVVNFGPGPAK | Cerebrum | — | 54.4 | 0 | MRM | — | |
| Q9Z2I9 | Sucla2 | ALIADSGLK | MockWholeBrain | — | 54.3 | 0 | MRM | — | |
| P28271 | Aco1 | YQQAGLPLIVLAGK | MockWholeBrain | — | 54.1 | 0 | MRM | — | |
| Q91VB8 | Hba-a1 | FLASVSTVLTSK | MockWholeBrain | — | 54.0 | 0 | MRM | — | |
| Q9Z1E4 | Gys1 | VGGIYTVLQTK | Cerebellum | — | 53.9 | 0 | MRM | — | |
| P09405 | Ncl | VFGNEIK | Cerebellum | — | 53.4 | 0 | MRM | — | |
| Q8CHT0 | Aldh4a1 | NAAGNFYINDK | MockWholeBrain | — | 53.0 | 0 | MRM | — | |
| P62827 | Ran | NLQYYDISAK | MockWholeBrain | — | 52.9 | 0 | MRM | — | |
| Q99JY9 | Actr3 | GVDDLDFFIGDEAIEKPTYATK | MockWholeBrain | — | 52.1 | 0 | MRM | — | |
| Q9QYG0 | Ndrg2 | LDPTQTSFLK | MockWholeBrain | — | 51.9 | 0 | MRM | — | |
| P16125 | Ldhb | SADTLWDIQK | MockWholeBrain | — | 51.9 | 0 | MRM | — | |
| Q9DBL1 | Acadsb | IGTIYEGASNIQLNTIAK | Cerebellum | — | 51.3 | 0 | MRM | — | |
| P82198 | Tgfbi | GDELADSALEIFK | Cerebrum | — | 50.9 | 0 | MRM | — | |
| P63101 | Ywhaz | YLAEVAAGDDK | MockWholeBrain | — | 50.4 | 0 | MRM | — |