SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P38060	Hmgcl	GYVSCALGCPYEGK	kidney	—	100.0	MRM	['Cys']
P38060	Hmgcl	GYVSCALGCPYEGK	liver	—	100.0	MRM	['Cys']
P38060	Hmgcl	GYVSCALGCPYEGK	Muscle	—	100.0	MRM	['Cys']
P38060	Hmgcl	GYVSCALGCPYEGK	Thymus	—	100.0	MRM	['Cys']
P38060	Hmgcl	GYVSCALGCPYEGK	Thyroid	—	100.0	MRM	['Cys']
P40124	Cap1	INSITVDNCK	Cerebellum	—	100.0	MRM	['Cys']
P40124	Cap1	INSITVDNCK	Heart	—	100.0	MRM	['Cys']
P40124	Cap1	INSITVDNCK	liver	—	100.0	MRM	['Cys']
P40124	Cap1	INSITVDNCK	LymphNodes	—	100.0	MRM	['Cys']
P46412	Gpx3	LFWEPMK	BoneMarrow	—	100.0	MRM	['Meth']
P46412	Gpx3	LFWEPMK	kidney	—	99.6	MRM	['Meth']
P46412	Gpx3	LFWEPMK	kidney	—	100.0	MRM	['Meth']
P46412	Gpx3	LFWEPMK	liver	—	100.0	MRM	['Meth']
P46412	Gpx3	LFWEPMK	lung	—	100.0	MRM	['Meth']
P46412	Gpx3	LFWEPMK	LymphNodes	—	100.0	MRM	['Meth']
P46412	Gpx3	LFWEPMK	Muscle	—	100.0	MRM	['Meth']
P46412	Gpx3	LFWEPMK	plasma	—	100.0	MRM	['Meth']
P46412	Gpx3	LFWEPMK	SalivaryGland	—	100.0	MRM	['Meth']
P46412	Gpx3	LFWEPMK	SmallIntestines	—	100.0	MRM	['Meth']
P46412	Gpx3	LFWEPMK	Spermatozoa	—	100.0	MRM	['Meth']
P46412	Gpx3	LFWEPMK	Thyroid	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	BrainStem	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	BrainStem	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	Cerebellum	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	Cerebrum	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	kidney	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	liver	—	100.0	MRM	['Meth']
P46664	Adss2	LDILDMFTEIK	lung	—	100.0	MRM	['Meth']
P46978	Stt3a	EGSPVLLNCLMYK	Cerebellum	—	100.0	MRM	['Meth', 'Cys']
P46978	Stt3a	EGSPVLLNCLMYK	liver	—	100.0	MRM	['Meth', 'Cys']
P47738	Aldh2	LGPALATGNVVVMK	BrainStem	—	100.0	MRM	['Meth']
P47738	Aldh2	LGPALATGNVVVMK	Heart	—	100.0	MRM	['Meth']
P47738	Aldh2	LGPALATGNVVVMK	kidney	—	100.0	MRM	['Meth']
P47738	Aldh2	LGPALATGNVVVMK	kidney	—	100.0	MRM	['Meth']
P47738	Aldh2	LGPALATGNVVVMK	liver	—	100.0	MRM	['Meth']
P47738	Aldh2	LGPALATGNVVVMK	liver	—	100.0	MRM	['Meth']
P47738	Aldh2	LGPALATGNVVVMK	lung	—	100.0	MRM	['Meth']
P47740	Aldh3a2	IVMEAAAK	liver	—	100.0	MRM	['Meth']
P47740	Aldh3a2	IVMEAAAK	liver	—	100.0	MRM	['Meth']
P47740	Aldh3a2	IVMEAAAK	LymphNodes	—	100.0	MRM	['Meth']
P47740	Aldh3a2	IVMEAAAK	SmallIntestines	—	100.0	MRM	['Meth']
P47740	Aldh3a2	IVMEAAAK	Spleen	—	100.0	MRM	['Meth']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	BrainStem	—	100.0	MRM	['Meth', 'Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	Cerebellum	—	100.0	MRM	['Meth', 'Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	Cerebellum	—	100.0	MRM	['Meth', 'Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	Cerebrum	—	100.0	MRM	['Meth', 'Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	kidney	—	100.0	MRM	['Meth', 'Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	liver	—	100.0	MRM	['Meth', 'Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	lung	—	100.0	MRM	['Meth', 'Cys']

SysQuan Mouse Database

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