| Uniprot ID | Gene | Peptide Sequence | Tissue | Mouse Conc. (fmol/μg) | Incorp. (%) | Missed Cleav. | Assays Available | PTM | |
|---|---|---|---|---|---|---|---|---|---|
| Q60668 | Hnrnpd | IFVGGLSPDTPEEK | MockWholeBrain | — | 86.2 | 0 | MRM | — | |
| O35181 | Nrg3 | EYVPTDLVDSK | Cerebellum | — | 86.0 | 0 | MRM | — | |
| P99027 | Rplp2 | VISELNGK | Cerebellum | — | 86.0 | 0 | MRM | — | |
| P60843 | Eif4a1 | GYDVIAQAQSGTGK | MockWholeBrain | — | 86.0 | 0 | MRM | — | |
| P43274 | H1-4 | ALAAAGYDVEK | Cerebellum | — | 85.9 | 0 | MRM | — | |
| P43277 | H1-3 | ALAAAGYDVEK | Cerebellum | — | 85.9 | 0 | MRM | — | |
| P35278 | Rab5c | QASPNIVIALAGNK | Cerebellum | — | 85.8 | 0 | MRM | — | |
| Q8BPF4 | — | FLASVSTVLTSK | BrainStem | — | 85.8 | 0 | MRM | — | |
| Q91VB8 | Hba-a1 | FLASVSTVLTSK | BrainStem | — | 85.8 | 0 | MRM | — | |
| Q3UIF3 | Hsp90aa1 | ELISNSSDALDK | Cerebellum | — | 85.7 | 0 | MRM | — | |
| Q8BFZ9 | Erlin2 | SVQTTLQTDEVK | MockWholeBrain | — | 85.7 | 0 | MRM | — | |
| O55143 | Atp2a2 | IGIFGQDEDVTSK | BrainStem | — | 85.7 | 0 | MRM | — | |
| F8VPK5 | Rock2 | NLLLLANSTEEQQK | MockWholeBrain | — | 85.6 | 0 | MRM | — | |
| E9PZF0 | Nme1nme2 | NIIHGSDSVESAEK | Cerebrum | — | 85.5 | 0 | MRM | — | |
| P12970 | Rpl7a | NFGIGQDIQPK | BrainStem | — | 85.4 | 0 | MRM | — | |
| Q9D0F9 | Pgm1 | IALYETPTGWK | Cerebrum | — | 85.4 | 0 | MRM | — | |
| Q9Z1Q5 | Clic1 | NSNPALNDNLEK | MockWholeBrain | — | 85.3 | 0 | MRM | — | |
| P40124 | Cap1 | EFHTTGLAWSK | MockWholeBrain | — | 85.3 | 0 | MRM | — | |
| Q8R050 | Gspt1 | TFDAQIVIIEHK | Cerebellum | — | 85.3 | 0 | MRM | — | |
| P50285 | Fmo1 | VAIVGAGVSGLASIK | BrainStem | — | 85.2 | 0 | MRM | — | |
| Q60930 | Vdac2 | YQLDPTASISAK | Cerebellum | — | 85.1 | 0 | MRM | — | |
| Q8C4U3 | Sfrp1 | QQASSWVPLLNK | BrainStem | — | 85.1 | 0 | MRM | — | |
| Q8BTM8 | Flna | LVSIDSK | MockWholeBrain | — | 85.0 | 0 | MRM | — | |
| Q61423 | Kcna4 | ALPENEFK | MockWholeBrain | — | 85.0 | 0 | MRM | — | |
| Q9D172 | Gatd3 | NLSTFAVDGK | MockWholeBrain | — | 85.0 | 0 | MRM | — | |
| Q8C1B7 | Septin11 | LTIVDTVGFGDQINK | Cerebellum | — | 85.0 | 0 | MRM | — | |
| P37804 | Tagln | AAEDYGVIK | MockWholeBrain | — | 84.8 | 0 | MRM | — | |
| Q91YL3 | Uckl1 | DIEGVIK | MockWholeBrain | — | 84.8 | 0 | MRM | — | |
| E9QA16 | Cald1 | INEWLTK | Cerebrum | — | 84.8 | 0 | MRM | — | |
| P47911 | Rpl6 | HLTDAYFK | MockWholeBrain | — | 84.7 | 0 | MRM | — | |
| Q8C1B7 | Septin11 | LTIVDTVGFGDQINK | MockWholeBrain | — | 84.7 | 0 | MRM | — | |
| G3UX26 | Vdac2 | YQLDPTASISAK | BrainStem | — | 84.6 | 0 | MRM | — | |
| P62270 | Rps18 | YSQVLANGLDNK | MockWholeBrain | — | 84.6 | 0 | MRM | — | |
| F7BJK1 | Pcdh1 | VTVLDTNDNAPK | Cerebellum | — | 84.6 | 0 | MRM | — | |
| P97798 | Neo1 | ITWADNSLPK | BrainStem | — | 84.6 | 0 | MRM | — | |
| P97798 | Neo1 | ITWADNSLPK | Cerebellum | — | 84.4 | 0 | MRM | — | |
| Q8K4Z3 | Naxe | FVPPALEK | Cerebellum | — | 84.3 | 0 | MRM | — | |
| Q3TDD9 | Ppp1r21 | EGLAQQVQQSLEK | MockWholeBrain | — | 84.3 | 0 | MRM | — | |
| P27659 | Rpl3 | IGQGYLIK | MockWholeBrain | — | 84.3 | 0 | MRM | — | |
| Q6P9Q4 | Fhod1 | FLENVAAAETEK | Cerebellum | — | 84.2 | 0 | MRM | — | |
| E9PV24 | Fga | RLEVDIDIK | BrainStem | — | 84.0 | 1 | MRM | — | |
| A2CG49 | Kalrn | LQGFEGTLTAQGK | MockWholeBrain | — | 84.0 | 0 | MRM | — | |
| Q9Z1G3 | Atp6v1c1 | EVLHELYK | BrainStem | — | 83.9 | 0 | MRM | — | |
| P40124 | Cap1 | VPTISINK | MockWholeBrain | — | 83.8 | 0 | MRM | — | |
| P31938 | Map2k1 | LEAFLTQK | BrainStem | — | 83.8 | 0 | MRM | — | |
| P62737 | Acta2 | VAPEEHPTLLTEAPLNPK | Cerebellum | — | 83.8 | 0 | MRM | — | |
| O09167 | Rpl21 | GTWVQLK | BrainStem | — | 83.7 | 0 | MRM | — | |
| P09055 | Itgb1 | WDTGENPIYK | Cerebrum | — | 83.6 | 0 | MRM | — | |
| Q9Z2I8 | Suclg2 | PANFLDLGGGVK | MockWholeBrain | — | 83.6 | 0 | MRM | — | |
| Q9QXS1 | Plec | VLADPSDDTK | BrainStem | — | 83.5 | 0 | MRM | — |