SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9DBP5	Cmpk1	EMDQTMAANAQK	liver	1.7	100.0	MRM+PRM	['Meth']
Q9ERS2	Ndufa13	ENLEEEAIIMK	kidney	99.1	100.0	MRM+PRM	['Meth']
Q9ERS2	Ndufa13	ENLEEEAIIMK	liver	52.1	100.0	MRM+PRM	['Meth']
Q9WUM5	Suclg1	IGIMPGHIHK	liver	9.1	100.0	MRM+PRM	['Meth']
Q9WUM5	Suclg1	IGIMPGHIHK	liver	9.1	100.0	MRM+PRM	['Meth']
Q8BH00	Aldh8a1	ELNLPFGGMK	liver	3.1	98.5	MRM+PRM	['Meth']
Q9DBG1	Cyp27a1	DFAHMPLLK	liver	2.8	98.5	MRM+PRM	['Meth']
P17751	Tpi1	VTNGAFTGEISPGMIK	liver	3.8	97.9	MRM+PRM	['Meth']
Q3UQ71	Ephx2	EMVTFLDK	kidney	0.6	98.1	MRM+PRM	['Meth']
Q571F8	Gls2	FALSAMDMEQK	liver	1.3	97.8	MRM+PRM	['Meth']
Q8VC19	Alas1	MDIISGTLGK	liver	0.2	98.4	MRM+PRM	['Meth']
Q9DCU9	Hoga1	MSSAALIHHYTK	liver	65.5	97.5	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	liver	19.2	97.5	MRM+PRM	['Meth']
Q00612	G6pdx	GPTEADELMK	liver	0.5	97.3	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	liver	0.8	96.6	MRM+PRM	['Meth']
P01027	C3	ACEPGVDYVYK	liver	1.0	95.9	MRM+PRM	['Cys']
Q9CZS1	Aldh1b1	LAPALATGNTVVMK	liver	1.0	96.4	MRM+PRM	['Meth']
Q99K67	Aass	DAGYEISLGLMPK	liver	33.0	94.9	MRM+PRM	['Meth']
Q8BGT5	Gpt2	ILTLESMNPQVK	liver	1.4	93.9	MRM+PRM	['Meth']
P17751	Tpi1	VTNGAFTGEISPGMIK	kidney	2.8	80.3	MRM+PRM	['Meth']
Q8BH95	Echs1	EGMTAFVEK	liver	6.0	79.6	MRM+PRM	['Meth']
Q9ERS2	Ndufa13	ENLEEEAIIMK	kidney	99.1	73.1	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	kidney	66.8	4.0	MRM+PRM	['Meth']
A0A2I3BPG4	Hlcs	FMAYLSQGGK	liver	0.0	—	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	liver	0.3	—	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	liver	0.3	—	MRM+PRM	['Meth']
P19157	Gstp1	MLLADQGQSWK	kidney	3.5	—	MRM+PRM	['Meth']
P46978	Stt3a	VGQAMASTEEK	liver	2.2	—	MRM+PRM	['Meth']
Q3TNA1	Xylb	ALIEGQFMAK	kidney	6.5	—	MRM+PRM	['Meth']
Q3TNA1	Xylb	ALIEGQFMAK	kidney	6.5	—	MRM+PRM	['Meth']
Q3UQ71	Ephx2	EMVTFLDK	kidney	0.6	—	MRM+PRM	['Meth']
Q571F8	Gls2	FALSAMDMEQK	liver	1.3	—	MRM+PRM	['Meth']
Q80UN9	Trit1	LSQVDPEMAAK	liver	0.0	—	MRM+PRM	['Meth']
Q8C0I1	Agps	ESISDVGFGMLK	kidney	1.1	—	MRM+PRM	['Meth']
Q8CHT0	Aldh4a1	DPQEPIMK	liver	1.9	—	MRM+PRM	['Meth']
Q91WN4	Kmo	MIHSLSGK	liver	2.3	—	MRM+PRM	['Meth']
Q99MR8	Mccc1	SFNDDAMLIEK	liver	1.1	—	MRM+PRM	['Meth']
Q9D2G2	Dlst	LGFMSAFVK	liver	3.0	—	MRM+PRM	['Meth']
Q9DBP5	Cmpk1	EMDQTMAANAQK	liver	1.7	—	MRM+PRM	['Meth']
A0A0R4J107	Apeh	SFNLSALEK	liver	0.2	100.0	MRM	—
E9Q616	Ahnak	AEGPEVDVNLPK	liver	1.2	100.0	MRM	—
E9QPE7	Myh11	YEILAANAIPK	liver	0.1	100.0	MRM	—
F7BJK1	Pcdh1	VTVLDTNDNAPK	kidney	0.1	100.0	MRM	—
F7D3W5	Gm45837	LLQDLFPK	liver	0.0	100.0	MRM	—
F8WGT1	Ahcyl2	VPEVELK	liver	0.1	100.0	MRM	—
G3UX26	Vdac2	YQLDPTASISAK	kidney	16.1	100.0	MRM	—
O08749	Dld	ALTGGIAHLFK	kidney	18.0	100.0	MRM	—
O08749	Dld	ALTGGIAHLFK	liver	1.6	100.0	MRM	—
O55023	Impa1	LQVSQQEDITK	kidney	8.4	100.0	MRM	—
O55143	Atp2a2	IGIFGQDEDVTSK	kidney	1.1	100.0	MRM	—

SysQuan Mouse Database

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