| Uniprot ID | Gene | Peptide Sequence | Tissue | Mouse Conc. (fmol/μg) | Incorp. (%) | Missed Cleav. | Assays Available | PTM | |
|---|---|---|---|---|---|---|---|---|---|
| Q9CPY7 | Lap3 | GITFDSGGISIK | Cerebrum | — | 96.4 | 0 | MRM | — | |
| Q8CI94 | Pygb | QAVDQISSGFFSPK | Cerebellum | — | 96.4 | 0 | MRM | — | |
| P35235 | Ptpn11 | GVDGSFLARPSK | Cerebrum | — | 96.4 | 0 | MRM | — | |
| P08249 | Mdh2 | ANTFVAELK | Cerebrum | — | 96.4 | 0 | MRM | — | |
| P50516 | Atp6v1a | EILQEEEDLAEIVQLVGK | MockWholeBrain | — | 96.4 | 0 | MRM | — | |
| P61620 | Sec61a1 | IIEVGDTPK | MockWholeBrain | — | 96.4 | 0 | MRM | — | |
| A0A0R4J259 | Syncrip | EQILEEFSK | MockWholeBrain | — | 96.4 | 0 | MRM | — | |
| P62960 | Ybx1 | GAEAANVTGPGGVPVQGSK | MockWholeBrain | — | 96.4 | 0 | MRM | — | |
| Q8C570 | Rae1 | VAIHYINPPNPAK | MockWholeBrain | — | 96.3 | 0 | MRM | — | |
| Q9CS84 | Nrxn1 | SADYVNLALK | Cerebellum | — | 96.3 | 0 | MRM | — | |
| Q9DB20 | Atp5po | YATALYSAASK | MockWholeBrain | — | 96.3 | 0 | MRM | — | |
| Q99PH4 | Aldh3a2 | HLTPVTLELGGK | BrainStem | — | 96.3 | 0 | MRM | — | |
| P28028 | Braf | LTQEHIEALLDK | BrainStem | — | 96.3 | 0 | MRM | — | |
| P43274 | H1-4 | ALAAAGYDVEK | BrainStem | — | 96.3 | 0 | MRM | — | |
| P43277 | H1-3 | ALAAAGYDVEK | BrainStem | — | 96.3 | 0 | MRM | — | |
| P54728 | Rad23b | IDIDPEETVK | BrainStem | — | 96.3 | 0 | MRM | — | |
| Q61194 | Pik3c2a | FSGLPSNDEPILSFSPK | BrainStem | — | 96.3 | 0 | MRM | — | |
| O89026 | Robo1 | IVEHPSDLIVSK | Cerebrum | — | 96.3 | 0 | MRM | — | |
| Q61024 | Asns | EAFSDGITSVK | MockWholeBrain | — | 96.3 | 0 | MRM | — | |
| Q8CHT0 | Aldh4a1 | SAFEYGGQK | Cerebrum | — | 96.3 | 0 | MRM | — | |
| Q61035 | Hars1 | LVSELWDAGIK | MockWholeBrain | — | 96.3 | 0 | MRM | — | |
| Q8BUV3 | Gphn | DNLPPFPASVK | MockWholeBrain | — | 96.3 | 0 | MRM | — | |
| Q9Z2I9 | Sucla2 | ALIADSGLK | Cerebellum | — | 96.3 | 0 | MRM | — | |
| Q8VEM8 | Slc25a3 | TVEALYK | MockWholeBrain | — | 96.3 | 0 | MRM | — | |
| P41241 | Csk | EGIIPANYVQK | Cerebellum | — | 96.2 | 0 | MRM | — | |
| Q9CQ65 | Mtap | EVLIETAK | MockWholeBrain | — | 96.2 | 0 | MRM | — | |
| Q6P069 | Sri | SGTVDPQELQK | BrainStem | — | 96.2 | 0 | MRM | — | |
| A0JNY3 | Gphn | DNLPPFPASVK | Cerebrum | — | 96.2 | 0 | MRM | — | |
| Q80T06 | Eef1d | ATNFLAHEK | MockWholeBrain | — | 96.2 | 0 | MRM | — | |
| Q9CWS0 | Ddah1 | TPEEYPESAK | Cerebrum | — | 96.2 | 0 | MRM | — | |
| P43274 | H1-4 | SETAPAAPAAPAPAEK | MockWholeBrain | — | 96.2 | 0 | MRM | — | |
| Q9CPR4 | Rpl17 | YSLDPENPTK | Cerebrum | — | 96.2 | 0 | MRM | — | |
| P32020 | Scp2 | LEEEGEQFVK | MockWholeBrain | — | 96.2 | 0 | MRM | — | |
| Q61838 | Pzp | GEAFTLK | Cerebellum | — | 96.2 | 0 | MRM | — | |
| P20108 | Prdx3 | GTAVVNGEFK | MockWholeBrain | — | 96.2 | 0 | MRM | — | |
| P62960 | Ybx1 | EDVFVHQTAIK | Cerebellum | — | 96.2 | 0 | MRM | — | |
| Q61792 | Lasp1 | TQDQISNIK | MockWholeBrain | — | 96.2 | 0 | MRM | — | |
| Q91YQ5 | Rpn1 | DISTLNSGK | MockWholeBrain | — | 96.2 | 0 | MRM | — | |
| Q99LD8 | Ddah2 | GGGDLPNSQEALQK | Cerebrum | — | 96.2 | 0 | MRM | — | |
| Q7TNG5 | Eml2 | VVLWGSDYSK | MockWholeBrain | — | 96.2 | 0 | MRM | — | |
| P50580 | Pa2g4 | TIIQNPTDQQK | Cerebrum | — | 96.2 | 0 | MRM | — | |
| Q8VDD5 | Myh9 | TDLLLEPYNK | Cerebrum | — | 96.1 | 0 | MRM | — | |
| Q9D0I9 | Rars1 | SDGGYTYDTSDLAAIK | MockWholeBrain | — | 96.1 | 0 | MRM | — | |
| Q8QZT1 | Acat1 | DGLTDVYNK | Cerebrum | — | 96.1 | 0 | MRM | — | |
| Q6S392 | Plec | VLADPSDDTK | MockWholeBrain | — | 96.1 | 0 | MRM | — | |
| P40124 | Cap1 | EFHTTGLAWSK | BrainStem | — | 96.1 | 0 | MRM | — | |
| Q8R0Y6 | Aldh1l1 | IGFTGSTEVGK | Cerebrum | — | 96.1 | 0 | MRM | — | |
| P62259 | Ywhae | NLLSVAYK | BrainStem | — | 96.1 | 0 | MRM | — | |
| P63101 | Ywhaz | NLLSVAYK | BrainStem | — | 96.1 | 0 | MRM | — | |
| A0A991EQV5 | Nploc4 | ESSSEQYVPDVFYK | Cerebrum | — | 96.1 | 0 | MRM | — |