SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P08003	Pdia4	FDVSGYPTIK	AdrenalGland	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	Bladder	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	BrainStem	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	Gallbladder	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	LargeIntestines	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	LymphNodes	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	Muscle	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	SmallIntestines	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	Spleen	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	Thymus	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	Thyroid	—	100.0	MRM+PRM	—
P08003	Pdia4	FDVSGYPTIK	Trachea	—	100.0	MRM+PRM	—
P08003	Pdia4	VEGFPTIYFAPSGDK	BrainStem	—	100.0	MRM+PRM	—
P08003	Pdia4	VEGFPTIYFAPSGDK	Cerebellum	—	100.0	MRM+PRM	—
P08003	Pdia4	VEGFPTIYFAPSGDK	Gallbladder	—	100.0	MRM+PRM	—
P08003	Pdia4	VEGFPTIYFAPSGDK	Thyroid	—	100.0	MRM+PRM	—
P08030	Aprt	AELEIQK	BrainStem	—	100.0	MRM+PRM	—
P08030	Aprt	AELEIQK	Cerebellum	—	100.0	MRM+PRM	—
P08030	Aprt	AELEIQK	Cerebrum	—	100.0	MRM+PRM	—
P08030	Aprt	AELEIQK	Gallbladder	—	100.0	MRM+PRM	—
P08030	Aprt	AELEIQK	kidney	—	100.0	MRM+PRM	—
P08030	Aprt	AELEIQK	lung	—	100.0	MRM+PRM	—
P08030	Aprt	AELEIQK	Muscle	—	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	AdrenalGland	—	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	BrainStem	—	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	Cerebellum	—	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	Cerebrum	—	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	lung	—	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	LymphNodes	—	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	plasma	—	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	Spleen	—	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	Thymus	—	100.0	MRM+PRM	—
P08113	Hsp90b1	ELISNASDALDK	BoneMarrow	—	100.0	MRM+PRM	—
P08113	Hsp90b1	ELISNASDALDK	lung	—	100.0	MRM+PRM	—
P08113	Hsp90b1	ELISNASDALDK	Thyroid	—	100.0	MRM+PRM	—
P08207	S100a10	EFPGFLENQK	BrainStem	—	100.0	MRM+PRM	—
P08207	S100a10	EFPGFLENQK	Heart	—	100.0	MRM+PRM	—
P08207	S100a10	EFPGFLENQK	kidney	—	100.0	MRM+PRM	—
P08207	S100a10	EFPGFLENQK	lung	—	100.0	MRM+PRM	—
P08249	Mdh2	IQEAGTEVVK	Muscle	—	100.0	MRM+PRM	—
P08249	Mdh2	IQEAGTEVVK	plasma	—	100.0	MRM+PRM	—
P08249	Mdh2	IQEAGTEVVK	Spleen	—	100.0	MRM+PRM	—
P08249	Mdh2	IQEAGTEVVK	TailSkin	—	100.0	MRM+PRM	—
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	Cerebellum	—	100.0	MRM+PRM	—
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	Cerebrum	—	100.0	MRM+PRM	—
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	Heart	—	100.0	MRM+PRM	—
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	kidney	—	100.0	MRM+PRM	—
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	lung	—	100.0	MRM+PRM	—
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	Muscle	—	100.0	MRM+PRM	—
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	TailSkin	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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