SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
Q9Z2C5	Mtm1	YNSHSLENESIK	Cerebellum	—	100.0	0	MRM+PRM	—
Q9Z2C5	Mtm1	YNSHSLENESIK	liver	—	100.0	0	MRM+PRM	—
Q9Z2D1	Mtmr2	IFIFDARPSVNAVANK	BrainStem	—	100.0	0	MRM+PRM	—
Q9Z2D1	Mtmr2	IFIFDARPSVNAVANK	Cerebellum	—	100.0	0	MRM+PRM	—
Q9Z2D1	Mtmr2	IFIFDARPSVNAVANK	Cerebrum	—	100.0	0	MRM+PRM	—
Q9Z2D1	Mtmr2	IFIFDARPSVNAVANK	MockWholeBrain	—	100.0	0	MRM+PRM	—
Q9Z2M7	Pmm2	YDYVFPENGLVAYK	BrainStem	—	100.0	0	MRM+PRM	—
Q9Z2M7	Pmm2	YDYVFPENGLVAYK	Cerebrum	—	100.0	0	MRM+PRM	—
Q9Z2M7	Pmm2	YDYVFPENGLVAYK	kidney	—	100.0	0	MRM+PRM	—
Q9Z2M7	Pmm2	YDYVFPENGLVAYK	liver	—	100.0	0	MRM+PRM	—
Q9Z2M7	Pmm2	YDYVFPENGLVAYK	SmallIntestines	—	100.0	0	MRM+PRM	—
Q9Z2M7	Pmm2	YDYVFPENGLVAYK	Spleen	—	100.0	0	MRM+PRM	—
Q9Z2T6	Krt85	ATAENEFVVLK	TailSkin	—	100.0	0	MRM+PRM	—
Q9Z2U0	Psma7	ILNPEEIEK	Cerebellum	—	100.0	0	MRM+PRM	—
Q9Z2U0	Psma7	ILNPEEIEK	Cerebrum	—	100.0	0	MRM+PRM	—
Q9Z2U0	Psma7	ILNPEEIEK	kidney	—	100.0	0	MRM+PRM	—
Q9Z2U0	Psma7	ILNPEEIEK	SmallIntestines	—	100.0	0	MRM+PRM	—
Q9Z2U0	Psma7	ILNPEEIEK	TailSkin	—	100.0	0	MRM+PRM	—
S4R1W1	Gapdhrt	VIPELNGK	Cerebrum	—	100.0	0	MRM+PRM	—
S4R1W1	Gapdhrt	VIPELNGK	Muscle	—	100.0	0	MRM+PRM	—
A0A0G2JEU1	Aldh2	YYAGWADKYHGK	BoneMarrow	—	100.0	1	MRM+PRM	—
A0A0G2JEU1	Aldh2	YYAGWADKYHGK	BrainStem	—	100.0	1	MRM+PRM	—
A0A0G2JEU1	Aldh2	YYAGWADKYHGK	Cerebellum	—	100.0	1	MRM+PRM	—
A0A0G2JEU1	Aldh2	YYAGWADKYHGK	Cerebrum	—	100.0	1	MRM+PRM	—
A0A0G2JEU1	Aldh2	YYAGWADKYHGK	liver	—	100.0	1	MRM+PRM	—
A0A0G2JEU1	Aldh2	YYAGWADKYHGK	Muscle	—	100.0	1	MRM+PRM	—
A0A0G2JEU1	Aldh2	YYAGWADKYHGK	Pancreas	—	100.0	1	MRM+PRM	—
A0A0G2JEU1	Aldh2	YYAGWADKYHGK	Spermatozoa	—	100.0	1	MRM+PRM	—
A0A0G2JEU1	Aldh2	YYAGWADKYHGK	Spleen	—	100.0	1	MRM+PRM	—
P24472	Gsta4	KFLQPGSQR	BrainStem	—	100.0	1	MRM+PRM	—
P24472	Gsta4	KFLQPGSQR	Cerebellum	—	100.0	1	MRM+PRM	—
P24472	Gsta4	KFLQPGSQR	Cerebrum	—	100.0	1	MRM+PRM	—
P24472	Gsta4	KFLQPGSQR	kidney	—	100.0	1	MRM+PRM	—
P24472	Gsta4	KFLQPGSQR	Muscle	—	100.0	1	MRM+PRM	—
P24472	Gsta4	KFLQPGSQR	SmallIntestines	—	100.0	1	MRM+PRM	—
P26039	Tln1	ASSLIEEAKK	BoneMarrow	—	100.0	1	MRM+PRM	—
P26039	Tln1	ASSLIEEAKK	kidney	—	100.0	1	MRM+PRM	—
P26039	Tln1	ASSLIEEAKK	Spleen	—	100.0	1	MRM+PRM	—
P30115	Gsta3	KFLQPGSQR	SmallIntestines	—	100.0	1	MRM+PRM	—
P45878	Fkbp2	KLVIPSELGYGER	Cerebellum	—	100.0	1	MRM+PRM	—
P45878	Fkbp2	KLVIPSELGYGER	Cerebrum	—	100.0	1	MRM+PRM	—
P45878	Fkbp2	KLVIPSELGYGER	kidney	—	100.0	1	MRM+PRM	—
P45878	Fkbp2	KLVIPSELGYGER	Muscle	—	100.0	1	MRM+PRM	—
P45878	Fkbp2	KLVIPSELGYGER	Spermatozoa	—	100.0	1	MRM+PRM	—
P47738	Aldh2	YYAGWADKYHGK	BoneMarrow	—	100.0	1	MRM+PRM	—
P47738	Aldh2	YYAGWADKYHGK	kidney	—	100.0	1	MRM+PRM	—
P47738	Aldh2	YYAGWADKYHGK	liver	—	100.0	1	MRM+PRM	—
P47738	Aldh2	YYAGWADKYHGK	MockWholeBrain	—	100.0	1	MRM+PRM	—
P47738	Aldh2	YYAGWADKYHGK	Muscle	—	100.0	1	MRM+PRM	—
P47738	Aldh2	YYAGWADKYHGK	SmallIntestines	—	100.0	1	MRM+PRM	—

SysQuan Mouse Database

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