SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9WVA4	Tagln2	DDGLFSGDPNWFPK	BrainStem	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	DDGLFSGDPNWFPK	Cerebellum	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	DDGLFSGDPNWFPK	Cerebrum	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	DDGLFSGDPNWFPK	kidney	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	DDGLFSGDPNWFPK	liver	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	DDGLFSGDPNWFPK	MockWholeBrain	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	DDGLFSGDPNWFPK	Muscle	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	DDGLFSGDPNWFPK	plasma	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	DDGLFSGDPNWFPK	TailSkin	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	NFSDNQLQEGK	Cerebrum	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	NFSDNQLQEGK	plasma	—	100.0	MRM+PRM	—
Q9WVA4	Tagln2	NFSDNQLQEGK	Spleen	—	100.0	MRM+PRM	—
Q9Z0S1	Bpnt1	EEDLVVWVDPLDGTK	liver	—	100.0	MRM+PRM	—
Q9Z110	Aldh18a1	LIDIFYPGDQQSVTFGTK	BrainStem	—	100.0	MRM+PRM	—
Q9Z110	Aldh18a1	LIDIFYPGDQQSVTFGTK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z110	Aldh18a1	LIDIFYPGDQQSVTFGTK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z1B3	Plcb1	SYIQEVVQYIK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z1B3	Plcb1	SYIQEVVQYIK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z1B3	Plcb1	SYIQEVVQYIK	MockWholeBrain	—	100.0	MRM+PRM	—
Q9Z1J3	Nfs1	EIIFTSGATESNNIAIK	BrainStem	—	100.0	MRM+PRM	—
Q9Z1J3	Nfs1	EIIFTSGATESNNIAIK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z1J3	Nfs1	EIIFTSGATESNNIAIK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z1J3	Nfs1	EIIFTSGATESNNIAIK	kidney	—	100.0	MRM+PRM	—
Q9Z1J3	Nfs1	EIIFTSGATESNNIAIK	liver	—	100.0	MRM+PRM	—
Q9Z1P6	Ndufa7	LPVGPSHK	BrainStem	—	100.0	MRM+PRM	—
Q9Z1P6	Ndufa7	LPVGPSHK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z1P6	Ndufa7	LPVGPSHK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z1P6	Ndufa7	LPVGPSHK	kidney	—	100.0	MRM+PRM	—
Q9Z1P6	Ndufa7	LPVGPSHK	MockWholeBrain	—	100.0	MRM+PRM	—
Q9Z1P6	Ndufa7	LPVGPSHK	SmallIntestines	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	BoneMarrow	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	BrainStem	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	SmallIntestines	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	Spleen	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	TailSkin	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	BoneMarrow	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	kidney	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	MockWholeBrain	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	Muscle	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	SmallIntestines	—	100.0	MRM+PRM	—
Q9Z1T2	Thbs4	AVAEPGIQLK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z1T2	Thbs4	AVAEPGIQLK	plasma	—	100.0	MRM+PRM	—
Q9Z280	Pld1	SLSYPFLLPK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z280	Pld1	SLSYPFLLPK	MockWholeBrain	—	100.0	MRM+PRM	—
Q9Z2C4	Mtmr1	LGIFENLNK	BrainStem	—	100.0	MRM+PRM	—
Q9Z2C4	Mtmr1	LGIFENLNK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z2C4	Mtmr1	LGIFENLNK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z2C4	Mtmr1	LGIFENLNK	kidney	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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