SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O70475	Ugdh	ILTTNTWSSELSK	Muscle	—	100.0	MRM+PRM	—
O88342	Wdr1	DYSGQGVVK	AdrenalGland	—	100.0	MRM+PRM	—
O88342	Wdr1	DYSGQGVVK	Bladder	—	100.0	MRM+PRM	—
O88342	Wdr1	DYSGQGVVK	BrainStem	—	100.0	MRM+PRM	—
O88342	Wdr1	DYSGQGVVK	Gallbladder	—	100.0	MRM+PRM	—
O88342	Wdr1	DYSGQGVVK	Heart	—	100.0	MRM+PRM	—
O88342	Wdr1	DYSGQGVVK	liver	—	100.0	MRM+PRM	—
O88342	Wdr1	DYSGQGVVK	Muscle	—	100.0	MRM+PRM	—
O88342	Wdr1	DYSGQGVVK	SalivaryGland	—	100.0	MRM+PRM	—
O88342	Wdr1	DYSGQGVVK	SciaticNerve	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	AdrenalGland	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	BoneMarrow	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	BrainStem	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	kidney	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	LargeIntestines	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	liver	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	lung	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	Muscle	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	Pancreas	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	plasma	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	SalivaryGland	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	SciaticNerve	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	SmallIntestines	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	TailSkin	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	Thymus	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	Thyroid	—	100.0	MRM+PRM	—
O88456	Capns1	LGFEEFK	Trachea	—	100.0	MRM+PRM	—
O88491	Nsd1	VGLFALSDIK	liver	—	100.0	MRM+PRM	—
O88502	Pde8a	IIPVIGQGGK	BrainStem	—	100.0	MRM+PRM	—
O88502	Pde8a	IIPVIGQGGK	Cerebellum	—	100.0	MRM+PRM	—
O88502	Pde8a	IIPVIGQGGK	Cerebrum	—	100.0	MRM+PRM	—
O88502	Pde8a	IIPVIGQGGK	Heart	—	100.0	MRM+PRM	—
O88502	Pde8a	IIPVIGQGGK	kidney	—	100.0	MRM+PRM	—
O88502	Pde8a	IIPVIGQGGK	lung	—	100.0	MRM+PRM	—
O88502	Pde8a	ISEEYFSQTDEEK	BrainStem	—	100.0	MRM+PRM	—
O88502	Pde8a	ISEEYFSQTDEEK	Cerebellum	—	100.0	MRM+PRM	—
O88502	Pde8a	ISEEYFSQTDEEK	Cerebrum	—	100.0	MRM+PRM	—
O88502	Pde8a	ISEEYFSQTDEEK	kidney	—	100.0	MRM+PRM	—
O88502	Pde8a	ISEEYFSQTDEEK	liver	—	100.0	MRM+PRM	—
O88502	Pde8a	ISEEYFSQTDEEK	lung	—	100.0	MRM+PRM	—
O88507	Cntfr	EYIIQVAAK	BrainStem	—	100.0	MRM+PRM	—
O88507	Cntfr	EYIIQVAAK	Cerebrum	—	100.0	MRM+PRM	—
O88507	Cntfr	EYIIQVAAK	Muscle	—	100.0	MRM+PRM	—
O88543	Cops3	VQLSGPQEAEK	BrainStem	—	100.0	MRM+PRM	—
O88543	Cops3	VQLSGPQEAEK	Heart	—	100.0	MRM+PRM	—
O88543	Cops3	VQLSGPQEAEK	kidney	—	100.0	MRM+PRM	—
O88543	Cops3	VQLSGPQEAEK	liver	—	100.0	MRM+PRM	—
O88543	Cops3	VQLSGPQEAEK	Spleen	—	100.0	MRM+PRM	—
O88569	Hnrnpa2b1	DYFEEYGK	BoneMarrow	—	100.0	MRM+PRM	—
O88569	Hnrnpa2b1	DYFEEYGK	Cerebellum	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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