SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9DC69	Ndufa9	YLLFHLVK	Cerebellum	—	100.0	MRM+PRM	—
Q9DC69	Ndufa9	YLLFHLVK	Cerebrum	—	100.0	MRM+PRM	—
Q9DC69	Ndufa9	YLLFHLVK	liver	—	100.0	MRM+PRM	—
Q9DC69	Ndufa9	YLLFHLVK	MockWholeBrain	—	100.0	MRM+PRM	—
Q9DCL9	Paics	DDANNDPQWSEEQLIAAK	BoneMarrow	—	100.0	MRM+PRM	—
Q9DCL9	Paics	DDANNDPQWSEEQLIAAK	Cerebellum	—	100.0	MRM+PRM	—
Q9DCL9	Paics	DDANNDPQWSEEQLIAAK	Cerebrum	—	100.0	MRM+PRM	—
Q9DCL9	Paics	DDANNDPQWSEEQLIAAK	kidney	—	100.0	MRM+PRM	—
Q9DCL9	Paics	DDANNDPQWSEEQLIAAK	liver	—	100.0	MRM+PRM	—
Q9DCL9	Paics	DDANNDPQWSEEQLIAAK	MockWholeBrain	—	100.0	MRM+PRM	—
Q9DCL9	Paics	DDANNDPQWSEEQLIAAK	Pancreas	—	100.0	MRM+PRM	—
Q9DCN1	Nudt12	EVEEESGVK	kidney	—	100.0	MRM+PRM	—
Q9DCV3	Dgat2	DYFPIQLVK	kidney	—	100.0	MRM+PRM	—
Q9EP69	Sacm1l	LEEQDEFEK	BrainStem	—	100.0	MRM+PRM	—
Q9EP69	Sacm1l	LEEQDEFEK	Cerebrum	—	100.0	MRM+PRM	—
Q9EP69	Sacm1l	LGVLHVGQK	BrainStem	—	100.0	MRM+PRM	—
Q9EP69	Sacm1l	LGVLHVGQK	Cerebellum	—	100.0	MRM+PRM	—
Q9EP69	Sacm1l	LGVLHVGQK	Cerebrum	—	100.0	MRM+PRM	—
Q9EP69	Sacm1l	LGVLHVGQK	kidney	—	100.0	MRM+PRM	—
Q9EP69	Sacm1l	LGVLHVGQK	liver	—	100.0	MRM+PRM	—
Q9EP69	Sacm1l	LGVLHVGQK	Pancreas	—	100.0	MRM+PRM	—
Q9EP75	Cyp4f14	FDPENIK	SmallIntestines	—	100.0	MRM+PRM	—
Q9EPA7	Nmnat1	GIISPVGDAYK	Cerebellum	—	100.0	MRM+PRM	—
Q9EPA7	Nmnat1	GIISPVGDAYK	Cerebrum	—	100.0	MRM+PRM	—
Q9EPL2	Clstn1	IHGQNVPFDAVVVDK	BrainStem	—	100.0	MRM+PRM	—
Q9EPL2	Clstn1	IHGQNVPFDAVVVDK	Cerebellum	—	100.0	MRM+PRM	—
Q9EPL2	Clstn1	IHGQNVPFDAVVVDK	Cerebrum	—	100.0	MRM+PRM	—
Q9EPL2	Clstn1	IHGQNVPFDAVVVDK	kidney	—	100.0	MRM+PRM	—
Q9EPS3	Glce	QQSEEAFPQEQQK	Cerebellum	—	100.0	MRM+PRM	—
Q9EQP2	Ehd4	EYQISAGDFPEVK	BrainStem	—	100.0	MRM+PRM	—
Q9EQP2	Ehd4	EYQISAGDFPEVK	Cerebellum	—	100.0	MRM+PRM	—
Q9EQU5	Set	LNEQASEEILK	BoneMarrow	—	100.0	MRM+PRM	—
Q9EQU5	Set	LNEQASEEILK	BrainStem	—	100.0	MRM+PRM	—
Q9EQU5	Set	LNEQASEEILK	Cerebellum	—	100.0	MRM+PRM	—
Q9ERE7	Mesd	DDDIEEGDLPEHK	BrainStem	—	100.0	MRM+PRM	—
Q9ERE7	Mesd	DDDIEEGDLPEHK	Cerebellum	—	100.0	MRM+PRM	—
Q9ERE7	Mesd	DDDIEEGDLPEHK	kidney	—	100.0	MRM+PRM	—
Q9ERE7	Mesd	DDDIEEGDLPEHK	liver	—	100.0	MRM+PRM	—
Q9ERE7	Mesd	DDDIEEGDLPEHK	MockWholeBrain	—	100.0	MRM+PRM	—
Q9EST5	Anp32b	DLSTIEPLK	TailSkin	—	100.0	MRM+PRM	—
Q9ESW4	Agk	GETVPLDVLQIK	BrainStem	—	100.0	MRM+PRM	—
Q9ESW4	Agk	GETVPLDVLQIK	kidney	—	100.0	MRM+PRM	—
Q9ESW4	Agk	GETVPLDVLQIK	liver	—	100.0	MRM+PRM	—
Q9ESW4	Agk	GETVPLDVLQIK	MockWholeBrain	—	100.0	MRM+PRM	—
Q9ET01	Pygl	VFADYEAYVK	BoneMarrow	—	100.0	MRM+PRM	—
Q9ET01	Pygl	VFADYEAYVK	BrainStem	—	100.0	MRM+PRM	—
Q9ET01	Pygl	VLYPNDNFFEGK	liver	—	100.0	MRM+PRM	—
Q9JHU4	Dync1h1	TPVSITEHPK	Cerebellum	—	100.0	MRM+PRM	—
Q9JHU4	Dync1h1	TPVSITEHPK	Cerebrum	—	100.0	MRM+PRM	—
Q9JHU4	Dync1h1	TPVSITEHPK	kidney	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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