SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
B2RXS4	Plxnb2	VFFLPSK	BrainStem	—	100.0	MRM	—
B2RXS4	Plxnb2	VFFLPSK	Cerebellum	—	100.0	MRM	—
B2RXS4	Plxnb2	VFFLPSK	Cerebrum	—	100.0	MRM	—
B2RY56	Rbm25	LLHDLQIGEK	BrainStem	—	100.0	MRM	—
B2RY56	Rbm25	LLHDLQIGEK	Cerebellum	—	100.0	MRM	—
B2RY56	Rbm25	LLHDLQIGEK	Cerebrum	—	100.0	MRM	—
B6ZHC5	Epb41l2	GLSPAQADSQFLENAK	BrainStem	—	100.0	MRM	—
B7ZN23	Nrg3	EYVPTDLVDSK	BrainStem	—	100.0	MRM	—
B8JJG7	Tfg	LLSNDEVTIK	BrainStem	—	100.0	MRM	—
B9EJA4	Clasp2	HAAVLVETIK	BrainStem	—	100.0	MRM	—
B9EJA4	Clasp2	HAAVLVETIK	Cerebellum	—	100.0	MRM	—
B9EJA4	Clasp2	HAAVLVETIK	MockWholeBrain	—	100.0	MRM	—
D3YWT1	Hnrnph3	STGEAFVQFASK	Cerebellum	—	100.0	MRM	—
D3YWT1	Hnrnph3	STGEAFVQFASK	MockWholeBrain	—	100.0	MRM	—
D3YXZ3	Klc2	YQDAETLYK	BrainStem	—	100.0	MRM	—
D3YXZ3	Klc2	YQDAETLYK	MockWholeBrain	—	100.0	MRM	—
D3YYT1	Glyr1	TSFFLGEVGNAAK	Cerebellum	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	BrainStem	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	Cerebellum	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	Cerebrum	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	MockWholeBrain	—	100.0	MRM	—
D3Z2Z1	Clip1	FLGETDFAK	BrainStem	—	100.0	MRM	—
D3Z2Z1	Clip1	FLGETDFAK	Cerebellum	—	100.0	MRM	—
D3Z2Z1	Clip1	FLGETDFAK	Cerebrum	—	100.0	MRM	—
D3Z3B8	Dlg1	QVTPDGESDEVGVIPSK	Cerebrum	—	100.0	MRM	—
D3Z3B8	Dlg1	QVTPDGESDEVGVIPSK	MockWholeBrain	—	100.0	MRM	—
D3Z3M7	Clip1	FLGETDFAK	BrainStem	—	100.0	MRM	—
D3Z6F5	Atp5f1a	STVAQLVK	Cerebellum	—	100.0	MRM	—
D3Z6F5	Atp5f1a	VVDALGNAIDGK	Cerebellum	—	100.0	MRM	—
D3Z7Q2	Smim20	AGIVQEDVQPPGLK	Cerebrum	—	100.0	MRM	—
D3Z7Q2	Smim20	AGIVQEDVQPPGLK	MockWholeBrain	—	100.0	MRM	—
D4AFX7	Dnajc13	FLENLLEK	Cerebrum	—	100.0	MRM	—
E0CYV0	Pcmt1	VIGIDHIK	Cerebrum	—	100.0	MRM	—
E0CYV0	Pcmt1	VIGIDHIK	MockWholeBrain	—	100.0	MRM	—
E9PV41	Diaph1	FQPLLDGLK	BrainStem	—	100.0	MRM	—
E9PV41	Diaph1	FQPLLDGLK	Cerebellum	—	100.0	MRM	—
E9PYH6	Setd1a	DFSLPVPK	BrainStem	—	100.0	MRM	—
E9PYH6	Setd1a	DFSLPVPK	Cerebellum	—	100.0	MRM	—
E9PYH6	Setd1a	DFSLPVPK	Cerebrum	—	100.0	MRM	—
E9PYH6	Setd1a	DFSLPVPK	MockWholeBrain	—	100.0	MRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	BrainStem	—	100.0	MRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	Cerebrum	—	100.0	MRM	—
E9PZF0	Nme1nme2	NIIHGSDSVESAEK	BrainStem	—	100.0	MRM	—
E9PZF0	Nme1nme2	NIIHGSDSVESAEK	Cerebellum	—	100.0	MRM	—
E9PZF0	Nme1nme2	NIIHGSDSVESAEK	liver	—	100.0	MRM	—
E9PZF0	Nme1nme2	TFIAIKPDGVQR	BrainStem	—	100.0	MRM	—
E9PZF0	Nme1nme2	TFIAIKPDGVQR	Cerebellum	—	100.0	MRM	—
E9PZF0	Nme1nme2	TFIAIKPDGVQR	Cerebrum	—	100.0	MRM	—
E9PZF0	Nme1nme2	TFIAIKPDGVQR	liver	—	100.0	MRM	—
E9Q1G8	Septin7	IYEFPETDDEEENK	BrainStem	—	100.0	MRM	—

SysQuan Mouse Database

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