SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q8VCM7	Fgg	EGFGHLSPTGTTEFWLGNEK	TailSkin	—	100.0	MRM+PRM	—
Q8VDD5	Myh9	IAQLEEQLDNETK	Cerebellum	—	100.0	MRM+PRM	—
Q8VDD5	Myh9	IAQLEEQLDNETK	Cerebrum	—	100.0	MRM+PRM	—
Q8VDD5	Myh9	IAQLEEQLDNETK	liver	—	100.0	MRM+PRM	—
Q8VDD5	Myh9	IAQLEEQLDNETK	SmallIntestines	—	100.0	MRM+PRM	—
Q8VDD5	Myh9	IAQLEEQLDNETK	Spleen	—	100.0	MRM+PRM	—
Q8VDD5	Myh9	IAQLEEQLDNETK	TailSkin	—	100.0	MRM+PRM	—
Q8VDI9	Alg9	AGQVWAPEGSTAFK	Cerebellum	—	100.0	MRM+PRM	—
Q8VDI9	Alg9	AGQVWAPEGSTAFK	Cerebrum	—	100.0	MRM+PRM	—
Q8VDI9	Alg9	AGQVWAPEGSTAFK	liver	—	100.0	MRM+PRM	—
Q8VDI9	Alg9	AGQVWAPEGSTAFK	MockWholeBrain	—	100.0	MRM+PRM	—
Q8VDN2	Atp1a1	AVAGDASESALLK	TailSkin	—	100.0	MRM+PRM	—
Q8VED9	Lgalsl	INGDLQITK	Cerebrum	—	100.0	MRM+PRM	—
Q8VED9	Lgalsl	INGDLQITK	MockWholeBrain	—	100.0	MRM+PRM	—
Q8VHL1	Setd7	SGPEAPEWYQVELK	kidney	—	100.0	MRM+PRM	—
Q8VHL1	Setd7	SGPEAPEWYQVELK	liver	—	100.0	MRM+PRM	—
Q8VHL1	Setd7	SGPEAPEWYQVELK	Muscle	—	100.0	MRM+PRM	—
Q91V92	Acly	HLLVHAPEDK	Muscle	—	100.0	MRM+PRM	—
Q91V92	Acly	HLLVHAPEDK	Pancreas	—	100.0	MRM+PRM	—
Q91VA0	Acsm1	VEFVSELPK	kidney	—	100.0	MRM+PRM	—
Q91VL4	Col1a2	DYEVDATLK	plasma	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FGSPIIILNLVK	BrainStem	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FGSPIIILNLVK	Cerebellum	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FGSPIIILNLVK	Cerebrum	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FGSPIIILNLVK	kidney	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FGSPIIILNLVK	liver	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FGSPIIILNLVK	MockWholeBrain	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FVQLGQSQHK	BrainStem	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FVQLGQSQHK	Cerebellum	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FVQLGQSQHK	Cerebrum	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FVQLGQSQHK	kidney	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FVQLGQSQHK	liver	—	100.0	MRM+PRM	—
Q91WF7	Fig4	FVQLGQSQHK	MockWholeBrain	—	100.0	MRM+PRM	—
Q91X72	Hpx	LWWLDLK	BoneMarrow	—	100.0	MRM+PRM	—
Q91X72	Hpx	LWWLDLK	BrainStem	—	100.0	MRM+PRM	—
Q91X72	Hpx	LWWLDLK	Cerebellum	—	100.0	MRM+PRM	—
Q91X72	Hpx	LWWLDLK	Cerebrum	—	100.0	MRM+PRM	—
Q91X72	Hpx	LWWLDLK	liver	—	100.0	MRM+PRM	—
Q91X72	Hpx	LWWLDLK	MockWholeBrain	—	100.0	MRM+PRM	—
Q91X72	Hpx	LWWLDLK	Muscle	—	100.0	MRM+PRM	—
Q91X72	Hpx	LWWLDLK	plasma	—	100.0	MRM+PRM	—
Q91X72	Hpx	LWWLDLK	SmallIntestines	—	100.0	MRM+PRM	—
Q91X72	Hpx	LWWLDLK	TailSkin	—	100.0	MRM+PRM	—
Q91X72	Hpx	VWVYPPEK	kidney	—	100.0	MRM+PRM	—
Q91X72	Hpx	VWVYPPEK	plasma	—	100.0	MRM+PRM	—
Q91XS1	Mtmr4	NADDEYLVTSIAK	Cerebrum	—	100.0	MRM+PRM	—
Q91XS1	Mtmr4	NADDEYLVTSIAK	liver	—	100.0	MRM+PRM	—
Q91Y97	Aldob	LDQGGAPLAGTNK	kidney	—	100.0	MRM+PRM	—
Q91YP0	L2hgdh	LIQQEDIK	Cerebellum	—	100.0	MRM+PRM	—
Q91Z53	Grhpr	LPEAIEEVK	Cerebellum	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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