SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
E9Q3A0	Trim36	SFRPAAQASFEDYVVNISK	BrainStem	—	100.0	None	—
E9Q3B9	Mgll	YWKPSGTPK	BrainStem	—	100.0	None	—
E9Q3B9	Mgll	YWKPSGTPK	Cerebellum	—	100.0	None	—
E9Q3B9	Mgll	YWKPSGTPK	Cerebrum	—	100.0	None	—
E9Q3C1	C2cd2	DPRPQSLQLTVEK	BrainStem	—	100.0	None	—
E9Q3C1	C2cd2	ENDLDSWELEK	BrainStem	—	100.0	None	—
E9Q3C1	C2cd2	ENDLDSWELEK	Cerebellum	—	100.0	None	—
E9Q3C1	C2cd2	ENDLDSWELEK	Cerebrum	—	100.0	None	—
E9Q3C1	C2cd2	HLVNAASPSVFLSTKPTQVK	BrainStem	—	100.0	None	—
E9Q3C1	C2cd2	LISGTEPDSLVLGSVTAEFSYVEPGELK	BrainStem	—	100.0	None	—
E9Q3C1	C2cd2	SWPAPPPVSAAK	BrainStem	—	100.0	None	—
E9Q3C1	C2cd2	SWPAPPPVSAAK	Cerebellum	—	100.0	None	—
E9Q3C1	C2cd2	SWPAPPPVSAAK	Cerebrum	—	100.0	None	—
E9Q3C1	C2cd2	WSFTHVPETAIK	BrainStem	—	100.0	None	—
E9Q3C1	C2cd2	WSFTHVPETAIK	Cerebellum	—	100.0	None	—
E9Q3C1	C2cd2	WSFTHVPETAIK	Cerebrum	—	100.0	None	—
E9Q3E2	Synpo	SSILLIDK	BrainStem	—	100.0	None	—
E9Q3E2	Synpo	VASEEEEVPLVVYLK	BrainStem	—	100.0	None	—
E9Q3G8	Nup153	ASEAGGIGGGGGGGK	BrainStem	—	100.0	None	—
E9Q3G8	Nup153	ASEAGGIGGGGGGGK	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	ASEAGGIGGGGGGGK	Cerebrum	—	100.0	None	—
E9Q3G8	Nup153	ASEAGGIGGGGGGGK	MockWholeBrain	—	100.0	None	—
E9Q3G8	Nup153	EGSVLDILK	BrainStem	—	100.0	None	—
E9Q3G8	Nup153	EGSVLDILK	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	EGSVLDILK	Cerebrum	—	100.0	None	—
E9Q3G8	Nup153	EGSVLDILK	MockWholeBrain	—	100.0	None	—
E9Q3G8	Nup153	FGDQGGFK	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	FGIPSSSSGLSQTLTSTGNFK	BrainStem	—	100.0	None	—
E9Q3G8	Nup153	FGIPSSSSGLSQTLTSTGNFK	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	FGVLSDSKPEEVK	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	FGVLSDSKPEEVK	Cerebrum	—	100.0	None	—
E9Q3G8	Nup153	FSKPTGDFK	MockWholeBrain	—	100.0	None	—
E9Q3G8	Nup153	GFGTSSSLNPAPSAFK	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	GGFTFGK	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	GGFTFGK	Cerebrum	—	100.0	None	—
E9Q3G8	Nup153	QQEPVTSTSLVFGK	BrainStem	—	100.0	None	—
E9Q3G8	Nup153	SGFNFGTLDTK	BrainStem	—	100.0	None	—
E9Q3G8	Nup153	SGFNFGTLDTK	Cerebrum	—	100.0	None	—
E9Q3G8	Nup153	SGIDNTVFQAK	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	SGIDNTVFQAK	Cerebrum	—	100.0	None	—
E9Q3G8	Nup153	SHSLSQHTAISSK	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	SHSLSQHTAISSK	Cerebrum	—	100.0	None	—
E9Q3G8	Nup153	SHSLSQHTAISSK	MockWholeBrain	—	100.0	None	—
E9Q3G8	Nup153	TEFSGSNSSSETVLSSSAQDITAVNSSSYK	BrainStem	—	100.0	None	—
E9Q3G8	Nup153	TEFSGSNSSSETVLSSSAQDITAVNSSSYK	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	TEFSGSNSSSETVLSSSAQDITAVNSSSYK	Cerebrum	—	100.0	None	—
E9Q3G8	Nup153	TSQLGDSPFYPGK	Cerebrum	—	100.0	None	—
E9Q3G8	Nup153	TSQLGDSPFYPGK	MockWholeBrain	—	100.0	None	—
E9Q3G8	Nup153	TVYFKPSLTPSGDLR	Cerebellum	—	100.0	None	—
E9Q3G8	Nup153	TVYFKPSLTPSGDLR	Cerebrum	—	100.0	None	—

SysQuan Mouse Database

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