SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q8CIZ8	Vwf	HIVTFDGQNFK	BoneMarrow	—	100.0	MRM+PRM	—
Q8CIZ8	Vwf	HIVTFDGQNFK	BrainStem	—	100.0	MRM+PRM	—
Q8CIZ8	Vwf	HIVTFDGQNFK	kidney	—	100.0	MRM+PRM	—
Q8JZK9	Hmgcs1	NSIYSGLEAFGDVK	BrainStem	—	100.0	MRM+PRM	—
Q8JZK9	Hmgcs1	NSIYSGLEAFGDVK	Cerebellum	—	100.0	MRM+PRM	—
Q8JZK9	Hmgcs1	NSIYSGLEAFGDVK	Cerebrum	—	100.0	MRM+PRM	—
Q8JZK9	Hmgcs1	NSIYSGLEAFGDVK	liver	—	100.0	MRM+PRM	—
Q8JZK9	Hmgcs1	NSIYSGLEAFGDVK	MockWholeBrain	—	100.0	MRM+PRM	—
Q8K009	Aldh1l2	DLGEEALNEYLK	BrainStem	—	100.0	MRM+PRM	—
Q8K009	Aldh1l2	DLGEEALNEYLK	Cerebellum	—	100.0	MRM+PRM	—
Q8K009	Aldh1l2	DLGEEALNEYLK	MockWholeBrain	—	100.0	MRM+PRM	—
Q8K016	Itih2	VQFELHYQEVK	BrainStem	—	100.0	MRM+PRM	—
Q8K0C9	Gmds	IINEVKPTEIYNLGAQSHVK	BoneMarrow	—	100.0	MRM+PRM	—
Q8K0C9	Gmds	IINEVKPTEIYNLGAQSHVK	BrainStem	—	100.0	MRM+PRM	—
Q8K0C9	Gmds	IINEVKPTEIYNLGAQSHVK	Cerebellum	—	100.0	MRM+PRM	—
Q8K0C9	Gmds	IINEVKPTEIYNLGAQSHVK	Cerebrum	—	100.0	MRM+PRM	—
Q8K0C9	Gmds	IINEVKPTEIYNLGAQSHVK	kidney	—	100.0	MRM+PRM	—
Q8K0C9	Gmds	IINEVKPTEIYNLGAQSHVK	liver	—	100.0	MRM+PRM	—
Q8K0C9	Gmds	IINEVKPTEIYNLGAQSHVK	MockWholeBrain	—	100.0	MRM+PRM	—
Q8K0C9	Gmds	IINEVKPTEIYNLGAQSHVK	Pancreas	—	100.0	MRM+PRM	—
Q8K0C9	Gmds	IINEVKPTEIYNLGAQSHVK	SmallIntestines	—	100.0	MRM+PRM	—
Q8K0D2	Habp2	VVLGDQDLK	BrainStem	—	100.0	MRM+PRM	—
Q8K0D2	Habp2	VVLGDQDLK	Cerebrum	—	100.0	MRM+PRM	—
Q8K0D2	Habp2	VVLGDQDLK	plasma	—	100.0	MRM+PRM	—
Q8K0D2	Habp2	VVLGDQDLK	SmallIntestines	—	100.0	MRM+PRM	—
Q8K3G7	Rtn4	HQAQIDHYLGLANK	TailSkin	—	100.0	MRM+PRM	—
Q8K3K7	Agpat2	NDNGDLLPFK	kidney	—	100.0	MRM+PRM	—
Q8R001	Mapre2	LLQASFK	Cerebellum	—	100.0	MRM+PRM	—
Q8R121	Serpina10	LFDEINPETK	plasma	—	100.0	MRM+PRM	—
Q8R1K4	Phykpl	LFFPEDPVK	BrainStem	—	100.0	MRM+PRM	—
Q8R1K4	Phykpl	LFFPEDPVK	Cerebellum	—	100.0	MRM+PRM	—
Q8R1K4	Phykpl	LFFPEDPVK	Cerebrum	—	100.0	MRM+PRM	—
Q8R4H7	Nags	SVLLDSLEVTASLAK	liver	—	100.0	MRM+PRM	—
Q8R555	Crtac1	DEASSVEVTWPDGK	BrainStem	—	100.0	MRM+PRM	—
Q8R555	Crtac1	DEASSVEVTWPDGK	Cerebellum	—	100.0	MRM+PRM	—
Q8R555	Crtac1	DEASSVEVTWPDGK	Cerebrum	—	100.0	MRM+PRM	—
Q8VCH7	Rdh10	FGVVGFHESLSHELK	BrainStem	—	100.0	MRM+PRM	—
Q8VCH7	Rdh10	FGVVGFHESLSHELK	Cerebellum	—	100.0	MRM+PRM	—
Q8VCH7	Rdh10	FGVVGFHESLSHELK	Cerebrum	—	100.0	MRM+PRM	—
Q8VCH7	Rdh10	FGVVGFHESLSHELK	kidney	—	100.0	MRM+PRM	—
Q8VCH7	Rdh10	FGVVGFHESLSHELK	liver	—	100.0	MRM+PRM	—
Q8VCM7	Fgg	EGFGHLSPTGTTEFWLGNEK	BrainStem	—	100.0	MRM+PRM	—
Q8VCM7	Fgg	EGFGHLSPTGTTEFWLGNEK	Cerebellum	—	100.0	MRM+PRM	—
Q8VCM7	Fgg	EGFGHLSPTGTTEFWLGNEK	Cerebrum	—	100.0	MRM+PRM	—
Q8VCM7	Fgg	EGFGHLSPTGTTEFWLGNEK	liver	—	100.0	MRM+PRM	—
Q8VCM7	Fgg	EGFGHLSPTGTTEFWLGNEK	MockWholeBrain	—	100.0	MRM+PRM	—
Q8VCM7	Fgg	EGFGHLSPTGTTEFWLGNEK	Muscle	—	100.0	MRM+PRM	—
Q8VCM7	Fgg	EGFGHLSPTGTTEFWLGNEK	Pancreas	—	100.0	MRM+PRM	—
Q8VCM7	Fgg	EGFGHLSPTGTTEFWLGNEK	SmallIntestines	—	100.0	MRM+PRM	—
Q8VCM7	Fgg	EGFGHLSPTGTTEFWLGNEK	Spleen	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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