SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
E9PXF0	Pcdh17	ELFSIDPK	Cerebellum	—	100.0	None	—
E9PXF0	Pcdh17	ELFSIDPK	Cerebrum	—	100.0	None	—
E9PXF0	Pcdh17	ELFSIDPK	MockWholeBrain	—	100.0	None	—
E9PXF0	Pcdh17	IAEYSHPQLGGGK	BrainStem	—	100.0	None	—
E9PXF0	Pcdh17	IAEYSHPQLGGGK	Cerebrum	—	100.0	None	—
E9PXF0	Pcdh17	IAEYSHPQLGGGK	MockWholeBrain	—	100.0	None	—
E9PXF0	Pcdh17	NLNYSVPEEQGAGTVIGNIGK	BrainStem	—	100.0	None	—
E9PXF0	Pcdh17	NLNYSVPEEQGAGTVIGNIGK	Cerebrum	—	100.0	None	—
E9PXF0	Pcdh17	NLNYSVPEEQGAGTVIGNIGK	MockWholeBrain	—	100.0	None	—
E9PXF0	Pcdh17	TLHPFWEDVTPVVELVVK	BrainStem	—	100.0	None	—
E9PXF0	Pcdh17	TNLFVPTVEANVETETYETVNPTGK	BrainStem	—	100.0	None	—
E9PXF0	Pcdh17	TNLFVPTVEANVETETYETVNPTGK	Cerebrum	—	100.0	None	—
E9PXF0	Pcdh17	VLENSAPHLLDVDADSGLLYTK	BrainStem	—	100.0	None	—
E9PXF0	Pcdh17	VLENSAPHLLDVDADSGLLYTK	Cerebrum	—	100.0	None	—
E9PXF0	Pcdh17	VLENSAPHLLDVDADSGLLYTK	MockWholeBrain	—	100.0	None	—
E9PXF0	Pcdh17	VLGGGGTGGGLGGPGSVPFK	BrainStem	—	100.0	None	—
E9PXF0	Pcdh17	VLGGGGTGGGLGGPGSVPFK	Cerebellum	—	100.0	None	—
E9PXF0	Pcdh17	VLGGGGTGGGLGGPGSVPFK	Cerebrum	—	100.0	None	—
E9PXF0	Pcdh17	VLGGGGTGGGLGGPGSVPFK	MockWholeBrain	—	100.0	None	—
E9PXF0	Pcdh17	VTDHGKPTLSAVAK	BrainStem	—	100.0	None	—
E9PXF0	Pcdh17	VTDHGKPTLSAVAK	Cerebrum	—	100.0	None	—
E9PXF0	Pcdh17	VTDHGKPTLSAVAK	MockWholeBrain	—	100.0	None	—
E9PXF8	Sbf2	EEIEGEEVSGLIQPAEVFAPK	BrainStem	—	100.0	None	—
E9PXF8	Sbf2	ELAEQLFK	BrainStem	—	100.0	None	—
E9PXF8	Sbf2	ELAEQLFK	Cerebellum	—	100.0	None	—
E9PXF8	Sbf2	ELAEQLFK	Cerebrum	—	100.0	None	—
E9PXF8	Sbf2	ELAEQLFK	MockWholeBrain	—	100.0	None	—
E9PXF8	Sbf2	HSAGSPGIASTNVPSYQK	BrainStem	—	100.0	None	—
E9PXF8	Sbf2	HSAGSPGIASTNVPSYQK	Cerebellum	—	100.0	None	—
E9PXF8	Sbf2	HSAGSPGIASTNVPSYQK	Cerebrum	—	100.0	None	—
E9PXF8	Sbf2	HSAGSPGIASTNVPSYQK	MockWholeBrain	—	100.0	None	—
E9PXF8	Sbf2	IHAEPVIHFHK	BrainStem	—	100.0	None	—
E9PXF8	Sbf2	LADYFIVVGYDHEKPAGPGEGLGK	BrainStem	—	100.0	None	—
E9PXF8	Sbf2	LADYFIVVGYDHEKPAGPGEGLGK	Cerebellum	—	100.0	None	—
E9PXF8	Sbf2	LADYFIVVGYDHEKPAGPGEGLGK	Cerebrum	—	100.0	None	—
E9PXF8	Sbf2	LWPTLSK	BrainStem	—	100.0	None	—
E9PXF8	Sbf2	LWPTLSK	Cerebellum	—	100.0	None	—
E9PXF8	Sbf2	LWPTLSK	Cerebrum	—	100.0	None	—
E9PXF8	Sbf2	LWPTLSK	MockWholeBrain	—	100.0	None	—
E9PXF8	Sbf2	SFPIASITK	Cerebellum	—	100.0	None	—
E9PXF8	Sbf2	SQNSPQAVSTSSLESSSSIEQEK	BrainStem	—	100.0	None	—
E9PXF8	Sbf2	SQNSPQAVSTSSLESSSSIEQEK	Cerebellum	—	100.0	None	—
E9PXF8	Sbf2	SQNSPQAVSTSSLESSSSIEQEK	Cerebrum	—	100.0	None	—
E9PXF8	Sbf2	SQNSPQAVSTSSLESSSSIEQEK	MockWholeBrain	—	100.0	None	—
E9PXF8	Sbf2	VAFDEEVSPEVVDIFK	BrainStem	—	100.0	None	—
E9PXF8	Sbf2	VNRPGWNEEDDISVSDDSELPTSTTLK	BrainStem	—	100.0	None	—
E9PXF8	Sbf2	VNRPGWNEEDDISVSDDSELPTSTTLK	Cerebellum	—	100.0	None	—
E9PXF8	Sbf2	VNRPGWNEEDDISVSDDSELPTSTTLK	Cerebrum	—	100.0	None	—
E9PXF8	Sbf2	VNRPGWNEEDDISVSDDSELPTSTTLK	MockWholeBrain	—	100.0	None	—
E9PXF8	Sbf2	VQELIQENLAK	Cerebrum	—	100.0	None	—

SysQuan Mouse Database

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