SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
F2Z3U3	Raph1	RPSVDSLVSK	Cerebrum	—	100.0	None	—
F2Z3U3	Raph1	SLPASGTPQSPPAVK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	SLPASGTPQSPPAVK	Cerebellum	—	100.0	None	—
F2Z3U3	Raph1	SLPASGTPQSPPAVK	Cerebrum	—	100.0	None	—
F2Z3U3	Raph1	SLPASGTPQSPPAVK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	SQSTVSSIFSEAWK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	SQSTVSSIFSEAWK	Cerebellum	—	100.0	None	—
F2Z3U3	Raph1	SQSTVSSIFSEAWK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	TESAYDWTSLSSSSIK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	TESAYDWTSLSSSSIK	Cerebellum	—	100.0	None	—
F2Z3U3	Raph1	TESAYDWTSLSSSSIK	Cerebrum	—	100.0	None	—
F2Z3U3	Raph1	TESAYDWTSLSSSSIK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	TVSPVVAQAVPPTPAPPVPPAK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	TVSPVVAQAVPPTPAPPVPPAK	Cerebrum	—	100.0	None	—
F2Z3U3	Raph1	TVSPVVAQAVPPTPAPPVPPAK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	VAVVNPQPQLWSK	Cerebellum	—	100.0	None	—
F2Z3U3	Raph1	VAVVNPQPQLWSK	Cerebrum	—	100.0	None	—
F2Z405	Serpina3g	VLVNYIYFK	Cerebrum	—	100.0	None	—
F2Z4B7	Raph1	NIAGKPSHLLTK	BrainStem	—	100.0	None	—
F2Z4B7	Raph1	NIAGKPSHLLTK	Cerebrum	—	100.0	None	—
F2Z4B7	Raph1	NIAGKPSHLLTK	MockWholeBrain	—	100.0	None	—
F4YJQ0	Trpm3	ASDILAFGHK	BrainStem	—	100.0	None	—
F4YJQ0	Trpm3	DFGQLAVELLDQSYK	BrainStem	—	100.0	None	—
F4YJQ0	Trpm3	EYPGFGWIYFK	BrainStem	—	100.0	None	—
F4YJQ0	Trpm3	HTQLSPTDAFGTIEFQGGGHSNK	BrainStem	—	100.0	None	—
F4YJQ0	Trpm3	LIGQHVGLTPSISVLQNEK	BrainStem	—	100.0	None	—
F4YJQ0	Trpm3	QAILFPNEEPSWK	BrainStem	—	100.0	None	—
F4YJQ0	Trpm3	SYYANFGVPVK	BrainStem	—	100.0	None	—
F4YJQ0	Trpm3	TSAFHSFESK	BrainStem	—	100.0	None	—
F6M2K0	Ncoa6	IGQILLTK	Cerebrum	—	100.0	None	—
F6M2K0	Ncoa6	SIVTTLVPSELISTAPTTK	Cerebrum	—	100.0	None	—
F6QB26	Gas7	DPQGNGTVAGFELLLQK	Cerebellum	—	100.0	None	—
F6QB26	Gas7	DPQGNGTVAGFELLLQK	Cerebrum	—	100.0	None	—
F6QB26	Gas7	DPQGNGTVAGFELLLQK	MockWholeBrain	—	100.0	None	—
F6QB26	Gas7	LSQNSLAAQEEGSLGEAWAQVK	BrainStem	—	100.0	None	—
F6QB26	Gas7	LSQNSLAAQEEGSLGEAWAQVK	Cerebellum	—	100.0	None	—
F6QB26	Gas7	LSQNSLAAQEEGSLGEAWAQVK	Cerebrum	—	100.0	None	—
F6QB26	Gas7	SLADEAEVHLK	BrainStem	—	100.0	None	—
F6QB26	Gas7	SLADEAEVHLK	MockWholeBrain	—	100.0	None	—
F6QB26	Gas7	TQQLELK	Cerebrum	—	100.0	None	—
F6QCI0	Taf15	EFHGNIIK	BrainStem	—	100.0	None	—
F6QCI0	Taf15	EFHGNIIK	Cerebellum	—	100.0	None	—
F6QCI0	Taf15	EFHGNIIK	Cerebrum	—	100.0	None	—
F6QD74	Cyfip2	GLQLLSK	Cerebrum	—	100.0	None	—
F6QD74	Cyfip2	YNYTSEEK	Cerebrum	—	100.0	None	—
F6QD74	Cyfip2	YQILNNEVFAILNK	Cerebrum	—	100.0	None	—
F6QKK2	Arl8a	DLAGALDEK	BrainStem	—	100.0	None	—
F6QKK2	Arl8a	NELHNLLDKPQLQGIPVLVLGNK	BrainStem	—	100.0	None	—
F6QQP6	Dab2ip	QDLAVLQDK	BrainStem	—	100.0	None	—
F6RDM4	Gls	HSFGPLDYESLQQELALK	BrainStem	—	100.0	None	—

SysQuan Mouse Database

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