SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
E9QQ10	Akap9	TQLLFSHEEELSK	Cerebrum	—	100.0	None	—
E9QQ10	Akap9	VLLEELEALK	BrainStem	—	100.0	None	—
E9QQ10	Akap9	VLLEELEALK	Cerebellum	—	100.0	None	—
E9QQ10	Akap9	VLLEELEALK	Cerebrum	—	100.0	None	—
E9QQ10	Akap9	VLLEELEALK	MockWholeBrain	—	100.0	None	—
E9QQ33	Sh3rf1	ALYDFEVK	Cerebrum	—	100.0	None	—
E9QQ33	Sh3rf1	EGDIVFVHK	Cerebrum	—	100.0	None	—
E9QQ38	Ddhd1	APSISQTPALK	BrainStem	—	100.0	None	—
E9QQ38	Ddhd1	ASILGAASIGK	BrainStem	—	100.0	None	—
E9QQ38	Ddhd1	ASILGAASIGK	Cerebellum	—	100.0	None	—
E9QQ38	Ddhd1	ASILGAASIGK	Cerebrum	—	100.0	None	—
E9QQ38	Ddhd1	ASILGAASIGK	MockWholeBrain	—	100.0	None	—
E9QQ38	Ddhd1	GYVEEATLEDKPSQTSHIVFVVHGIGQK	BrainStem	—	100.0	None	—
E9QQ38	Ddhd1	GYVEEATLEDKPSQTSHIVFVVHGIGQK	Cerebrum	—	100.0	None	—
E9QQ38	Ddhd1	HLLDELYITK	BrainStem	—	100.0	None	—
E9QQ38	Ddhd1	HLLDELYITK	Cerebellum	—	100.0	None	—
E9QQ38	Ddhd1	HLLDELYITK	Cerebrum	—	100.0	None	—
E9QQ38	Ddhd1	HLLDELYITK	MockWholeBrain	—	100.0	None	—
E9QQ38	Ddhd1	HYGESITNIGK	BrainStem	—	100.0	None	—
E9QQ38	Ddhd1	HYGESITNIGK	Cerebellum	—	100.0	None	—
E9QQ38	Ddhd1	LEPLILK	Cerebellum	—	100.0	None	—
E9QQ38	Ddhd1	LEPLILK	Cerebrum	—	100.0	None	—
E9QQ38	Ddhd1	LTLDGDTVDSITPDK	BrainStem	—	100.0	None	—
E9QQ38	Ddhd1	LTLDGDTVDSITPDK	Cerebellum	—	100.0	None	—
E9QQ38	Ddhd1	LTLDGDTVDSITPDK	Cerebrum	—	100.0	None	—
E9QQ38	Ddhd1	LTLDGDTVDSITPDK	MockWholeBrain	—	100.0	None	—
E9QQ38	Ddhd1	TWKPFIGYDSLR	Cerebrum	—	100.0	None	—
E9QQ99	Syvn1	HQFYPTVVYLTK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	ETPPPPAAPPKPGK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	ETPPPPAAPPKPGK	Cerebrum	—	100.0	None	—
F2Z3U3	Raph1	ETPPPPAAPPKPGK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	FAPPAESGSPSK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	LHLSGVNLPGIHQQGIVSAK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	LHLSGVNLPGIHQQGIVSAK	Cerebrum	—	100.0	None	—
F2Z3U3	Raph1	LHLSGVNLPGIHQQGIVSAK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	LQNAAQHSGTLFK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	LQNAAQHSGTLFK	Cerebellum	—	100.0	None	—
F2Z3U3	Raph1	LQNAAQHSGTLFK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	LTQSLDSDKPK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	LTQSLDSDKPK	Cerebrum	—	100.0	None	—
F2Z3U3	Raph1	LTQSLDSDKPK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	QIASQFPPPPTPPPVDSQPLK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	QIASQFPPPPTPPPVDSQPLK	Cerebellum	—	100.0	None	—
F2Z3U3	Raph1	QIASQFPPPPTPPPVDSQPLK	Cerebrum	—	100.0	None	—
F2Z3U3	Raph1	QIASQFPPPPTPPPVDSQPLK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	QLYTNYQEALK	BrainStem	—	100.0	None	—
F2Z3U3	Raph1	QLYTNYQEALK	Cerebrum	—	100.0	None	—
F2Z3U3	Raph1	QLYTNYQEALK	MockWholeBrain	—	100.0	None	—
F2Z3U3	Raph1	QQSFGVKPPPSPLSPVPSVVK	Cerebrum	—	100.0	None	—
F2Z3U3	Raph1	QQSFGVKPPPSPLSPVPSVVK	MockWholeBrain	—	100.0	None	—

SysQuan Mouse Database

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