SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q7TPR4	Actn1	DYETATLSEIK	BrainStem	—	100.0	MRM+PRM	—
Q7TPR4	Actn1	DYETATLSEIK	Cerebellum	—	100.0	MRM+PRM	—
Q7TPR4	Actn1	DYETATLSEIK	kidney	—	100.0	MRM+PRM	—
Q7TSV4	Pgm2	DPDPEFPTVK	BrainStem	—	100.0	MRM+PRM	—
Q7TSV4	Pgm2	DPDPEFPTVK	Cerebellum	—	100.0	MRM+PRM	—
Q7TSV4	Pgm2	DPDPEFPTVK	Cerebrum	—	100.0	MRM+PRM	—
Q7TSV4	Pgm2	DPDPEFPTVK	kidney	—	100.0	MRM+PRM	—
Q7TSV4	Pgm2	DPDPEFPTVK	MockWholeBrain	—	100.0	MRM+PRM	—
Q7TSV4	Pgm2	DPDPEFPTVK	Pancreas	—	100.0	MRM+PRM	—
Q80UG5	Septin9	FINDQYEK	BoneMarrow	—	100.0	MRM+PRM	—
Q80UG5	Septin9	FINDQYEK	BrainStem	—	100.0	MRM+PRM	—
Q80UG5	Septin9	FINDQYEK	Cerebellum	—	100.0	MRM+PRM	—
Q80UG5	Septin9	FINDQYEK	kidney	—	100.0	MRM+PRM	—
Q80UN9	Trit1	TLPLVVILGATGTGK	liver	—	100.0	MRM+PRM	—
Q80XI4	Pip4k2b	DNDFINEGQK	Cerebellum	—	100.0	MRM+PRM	—
Q80XI4	Pip4k2b	DNDFINEGQK	Cerebrum	—	100.0	MRM+PRM	—
Q80XI4	Pip4k2b	DNDFINEGQK	liver	—	100.0	MRM+PRM	—
Q80XI4	Pip4k2b	DNDFINEGQK	MockWholeBrain	—	100.0	MRM+PRM	—
Q8BFZ3	Actbl2	VAPDEHPILLTEAPLNPK	BrainStem	—	100.0	MRM+PRM	—
Q8BFZ3	Actbl2	VAPDEHPILLTEAPLNPK	Cerebellum	—	100.0	MRM+PRM	—
Q8BFZ3	Actbl2	VAPDEHPILLTEAPLNPK	Cerebrum	—	100.0	MRM+PRM	—
Q8BFZ3	Actbl2	VAPDEHPILLTEAPLNPK	kidney	—	100.0	MRM+PRM	—
Q8BFZ3	Actbl2	VAPDEHPILLTEAPLNPK	MockWholeBrain	—	100.0	MRM+PRM	—
Q8BG32	Psmd11	DIQENDEEAVQVK	Cerebellum	—	100.0	MRM+PRM	—
Q8BG32	Psmd11	DIQENDEEAVQVK	Cerebrum	—	100.0	MRM+PRM	—
Q8BG32	Psmd11	DIQENDEEAVQVK	kidney	—	100.0	MRM+PRM	—
Q8BG32	Psmd11	DIQENDEEAVQVK	liver	—	100.0	MRM+PRM	—
Q8BG32	Psmd11	DIQENDEEAVQVK	Pancreas	—	100.0	MRM+PRM	—
Q8BG32	Psmd11	DIQENDEEAVQVK	Spleen	—	100.0	MRM+PRM	—
Q8BH00	Aldh8a1	DSYDFFTEIK	liver	—	100.0	MRM+PRM	—
Q8BH69	Sephs1	NEVSFVIHNLPVLAK	BoneMarrow	—	100.0	MRM+PRM	—
Q8BH69	Sephs1	NEVSFVIHNLPVLAK	BrainStem	—	100.0	MRM+PRM	—
Q8BH69	Sephs1	NEVSFVIHNLPVLAK	Cerebellum	—	100.0	MRM+PRM	—
Q8BH69	Sephs1	NEVSFVIHNLPVLAK	Cerebrum	—	100.0	MRM+PRM	—
Q8BH69	Sephs1	NEVSFVIHNLPVLAK	kidney	—	100.0	MRM+PRM	—
Q8BH69	Sephs1	NEVSFVIHNLPVLAK	liver	—	100.0	MRM+PRM	—
Q8BH69	Sephs1	NEVSFVIHNLPVLAK	MockWholeBrain	—	100.0	MRM+PRM	—
Q8BJ03	Cox15	YQQFPEFK	Cerebrum	—	100.0	MRM+PRM	—
Q8BJ40	Gm6498	VIPELNGK	liver	—	100.0	MRM+PRM	—
Q8BJ56	Pnpla2	YVDGGISDNLPLYELK	BrainStem	—	100.0	MRM+PRM	—
Q8BJ56	Pnpla2	YVDGGISDNLPLYELK	Cerebrum	—	100.0	MRM+PRM	—
Q8BJ56	Pnpla2	YVDGGISDNLPLYELK	kidney	—	100.0	MRM+PRM	—
Q8BJ56	Pnpla2	YVDGGISDNLPLYELK	MockWholeBrain	—	100.0	MRM+PRM	—
Q8BKC8	Pi4kb	NLGFETSAFK	BrainStem	—	100.0	MRM+PRM	—
Q8BKC8	Pi4kb	NLGFETSAFK	Cerebellum	—	100.0	MRM+PRM	—
Q8BKC8	Pi4kb	NLGFETSAFK	Cerebrum	—	100.0	MRM+PRM	—
Q8BKZ9	Pdhx	GIQEIADSVK	Spermatozoa	—	100.0	MRM+PRM	—
Q8BPB5	Efemp1	ELPQSIVYK	plasma	—	100.0	MRM+PRM	—
Q8BSH3	Tpm1	SIDDLEDELYAQK	BrainStem	—	100.0	MRM+PRM	—
Q8BSH3	Tpm1	SIDDLEDELYAQK	liver	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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