SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
E9QNF7	Cntnap2	HYYWGGSEPGIQK	MockWholeBrain	—	100.0	None	—
E9QNF7	Cntnap2	LDHYPAVGYHLPSSSDTLFNSPK	Cerebellum	—	100.0	None	—
E9QNF7	Cntnap2	LLNTPDGSPYTWWVGK	Cerebellum	—	100.0	None	—
E9QNF7	Cntnap2	LLNTPDGSPYTWWVGK	MockWholeBrain	—	100.0	None	—
E9QNF7	Cntnap2	NWKPYHQDGNIWAFPGNVNSDSVVR	BrainStem	—	100.0	None	—
E9QNF7	Cntnap2	NWKPYHQDGNIWAFPGNVNSDSVVR	Cerebrum	—	100.0	None	—
E9QNF7	Cntnap2	TNSPLQVK	Cerebellum	—	100.0	None	—
E9QNF7	Cntnap2	TNSPLQVK	MockWholeBrain	—	100.0	None	—
E9QNF7	Cntnap2	TSESEGVLLHGEGQQGDYITLELK	BrainStem	—	100.0	None	—
E9QNF7	Cntnap2	TSESEGVLLHGEGQQGDYITLELK	Cerebellum	—	100.0	None	—
E9QNF7	Cntnap2	TSESEGVLLHGEGQQGDYITLELK	Cerebrum	—	100.0	None	—
E9QNF7	Cntnap2	TSESEGVLLHGEGQQGDYITLELK	MockWholeBrain	—	100.0	None	—
E9QNF7	Cntnap2	VQFNHIAPLK	BrainStem	—	100.0	None	—
E9QNF7	Cntnap2	VQFNHIAPLK	Cerebellum	—	100.0	None	—
E9QNF7	Cntnap2	VQFNHIAPLK	Cerebrum	—	100.0	None	—
E9QNL5	Sult1a1	SLPEETVDLIVHHTSFK	BrainStem	—	100.0	None	—
E9QNL5	Sult1a1	SLPEETVDLIVHHTSFK	Cerebrum	—	100.0	None	—
E9QNN1	Dhx9	LGGIGQFLAK	BrainStem	—	100.0	None	—
E9QNN1	Dhx9	LGGIGQFLAK	Cerebellum	—	100.0	None	—
E9QNN1	Dhx9	LNQYFQK	BrainStem	—	100.0	None	—
E9QNN1	Dhx9	LNQYFQK	Cerebellum	—	100.0	None	—
E9QNN1	Dhx9	QLYHLGVIEAYSGLTK	BrainStem	—	100.0	None	—
E9QNN1	Dhx9	QLYHLGVIEAYSGLTK	Cerebellum	—	100.0	None	—
E9QNN1	Dhx9	QLYHLGVIEAYSGLTK	MockWholeBrain	—	100.0	None	—
E9QNN1	Dhx9	TPLHEIALSIK	BrainStem	—	100.0	None	—
E9QNN1	Dhx9	VFDPVPDGVTK	BrainStem	—	100.0	None	—
E9QNN1	Dhx9	VFDPVPDGVTK	Cerebellum	—	100.0	None	—
E9QNN1	Dhx9	VFDPVPDGVTK	Cerebrum	—	100.0	None	—
E9QNN1	Dhx9	VFDPVPDGVTK	MockWholeBrain	—	100.0	None	—
E9QNN1	Dhx9	YGDGPRPPK	BrainStem	—	100.0	None	—
E9QNN1	Dhx9	YGDGPRPPK	Cerebellum	—	100.0	None	—
E9QNN1	Dhx9	YGDGPRPPK	Cerebrum	—	100.0	None	—
E9QNN1	Dhx9	YPSPFFVFGEK	BrainStem	—	100.0	None	—
E9QNN1	Dhx9	YPSPFFVFGEK	Cerebrum	—	100.0	None	—
E9QNN1	Dhx9	YPSPFFVFGEK	MockWholeBrain	—	100.0	None	—
E9QP44	Arap2	DEELQVDSPVEK	Cerebrum	—	100.0	None	—
E9QP44	Arap2	DFTDSSLK	Cerebrum	—	100.0	None	—
E9QP44	Arap2	DSLFGGVNVK	Cerebellum	—	100.0	None	—
E9QP44	Arap2	DSLFGGVNVK	Cerebrum	—	100.0	None	—
E9QP44	Arap2	ELPDEQTLQK	Cerebellum	—	100.0	None	—
E9QP44	Arap2	ELYPYWVSALDTQDEK	Cerebrum	—	100.0	None	—
E9QP44	Arap2	FLTIDSIK	Cerebrum	—	100.0	None	—
E9QP44	Arap2	HQLEDVTGVLK	Cerebellum	—	100.0	None	—
E9QP44	Arap2	IDPLITK	Cerebellum	—	100.0	None	—
E9QP44	Arap2	IDPLITK	Cerebrum	—	100.0	None	—
E9QP44	Arap2	SFLSDIDDALLTK	BrainStem	—	100.0	None	—
E9QP44	Arap2	SFLSDIDDALLTK	Cerebellum	—	100.0	None	—
E9QP44	Arap2	SFLSDIDDALLTK	Cerebrum	—	100.0	None	—
E9QP44	Arap2	TLLASLTK	Cerebrum	—	100.0	None	—
E9QP54	Ahi1	EQDVDATVPENAK	BrainStem	—	100.0	None	—

SysQuan Mouse Database

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