SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
E9PWQ3	Col6a3	SGFPLLK	LargeIntestines	—	100.0	MRM+PRM	—
E9PWQ3	Col6a3	SGFPLLK	liver	—	100.0	MRM+PRM	—
E9PWQ3	Col6a3	SGFPLLK	LymphNodes	—	100.0	MRM+PRM	—
E9PWQ3	Col6a3	SGFPLLK	Muscle	—	100.0	MRM+PRM	—
E9PWQ3	Col6a3	SGFPLLK	SmallIntestines	—	100.0	MRM+PRM	—
E9PWQ3	Col6a3	SGFPLLK	TailSkin	—	100.0	MRM+PRM	—
E9PWQ3	Col6a3	SGFPLLK	Thymus	—	100.0	MRM+PRM	—
E9PX59	Samd9l	NSYISDTLGQVYK	lung	—	100.0	MRM+PRM	—
E9PYH0	Vcan	VGHDYQWIGLNDK	BrainStem	—	100.0	MRM+PRM	—
E9PYH0	Vcan	VGHDYQWIGLNDK	Gallbladder	—	100.0	MRM+PRM	—
E9PYH6	Setd1a	DFSLPVPK	BrainStem	—	100.0	MRM+PRM	—
E9PYH6	Setd1a	DFSLPVPK	Cerebellum	—	100.0	MRM+PRM	—
E9PYH6	Setd1a	DFSLPVPK	Cerebrum	—	100.0	MRM+PRM	—
E9PYH6	Setd1a	DFSLPVPK	liver	—	100.0	MRM+PRM	—
E9PYH6	Setd1a	DFSLPVPK	lung	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	BoneMarrow	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	Cerebellum	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	Cerebrum	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	liver	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	lung	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	plasma	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	TailSkin	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	Thymus	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	DRPFFPGLVK	Trachea	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	GLVGEIIK	BoneMarrow	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	GLVGEIIK	Cerebellum	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	GLVGEIIK	Cerebrum	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	GLVGEIIK	lung	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	GLVGEIIK	Muscle	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	GLVGEIIK	plasma	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	GLVGEIIK	TailSkin	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	NIIHGSDSVESAEK	Cerebellum	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	NIIHGSDSVESAEK	liver	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	NIIHGSDSVESAEK	Muscle	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	NIIHGSDSVESAEK	plasma	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	NIIHGSDSVESAEK	TailSkin	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	TFIAIKPDGVQR	Cerebellum	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	TFIAIKPDGVQR	Cerebrum	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	TFIAIKPDGVQR	lung	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	TFIAIKPDGVQR	Muscle	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	TFIAIKPDGVQR	Spleen	—	100.0	MRM+PRM	—
E9PZF0	Nme1nme2	TFIAIKPDGVQR	TailSkin	—	100.0	MRM+PRM	—
E9Q0M9	Cald1	QQEAALELEELK	Cerebrum	—	100.0	MRM+PRM	—
E9Q2W9	Actn4	DYETATLSDIK	BrainStem	—	100.0	MRM+PRM	—
E9Q2W9	Actn4	DYETATLSDIK	Heart	—	100.0	MRM+PRM	—
E9Q3L2	Pi4ka	DFLVIPSPVLVK	AdrenalGland	—	100.0	MRM+PRM	—
E9Q3L2	Pi4ka	DFLVIPSPVLVK	Bladder	—	100.0	MRM+PRM	—
E9Q3L2	Pi4ka	DFLVIPSPVLVK	BoneMarrow	—	100.0	MRM+PRM	—
E9Q3L2	Pi4ka	DFLVIPSPVLVK	BrainStem	—	100.0	MRM+PRM	—
E9Q3L2	Pi4ka	DFLVIPSPVLVK	Cerebellum	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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