SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
E9Q8Z5	Ctnnd1	KPTEDPANDTVDFPK	BrainStem	—	100.0	None	—
E9Q8Z5	Ctnnd1	KPTEDPANDTVDFPK	Cerebellum	—	100.0	None	—
E9Q912	Rap1gds1	EDDVAELK	BrainStem	—	100.0	None	—
E9Q912	Rap1gds1	EDDVAELK	Cerebrum	—	100.0	None	—
E9Q912	Rap1gds1	EDDVAELK	MockWholeBrain	—	100.0	None	—
E9Q912	Rap1gds1	EQFASTNIAEELVK	BrainStem	—	100.0	None	—
E9Q912	Rap1gds1	EQFASTNIAEELVK	Cerebellum	—	100.0	None	—
E9Q912	Rap1gds1	EVQDLAFLDVVSK	BrainStem	—	100.0	None	—
E9Q912	Rap1gds1	EVQDLAFLDVVSK	Cerebrum	—	100.0	None	—
E9Q912	Rap1gds1	NLAIPVVNK	BrainStem	—	100.0	None	—
E9Q912	Rap1gds1	NLAIPVVNK	Cerebellum	—	100.0	None	—
E9Q912	Rap1gds1	TIVQSGGIK	Cerebellum	—	100.0	None	—
E9Q912	Rap1gds1	TIVQSGGIK	Cerebrum	—	100.0	None	—
E9Q912	Rap1gds1	VADIIAEVAK	BrainStem	—	100.0	None	—
E9Q912	Rap1gds1	VADIIAEVAK	Cerebellum	—	100.0	None	—
E9Q912	Rap1gds1	VADIIAEVAK	Cerebrum	—	100.0	None	—
E9Q947	Nol4	IVQLLNGSESSSTDNAK	MockWholeBrain	—	100.0	None	—
E9Q947	Nol4	NLLISDLK	Cerebellum	—	100.0	None	—
E9Q947	Nol4	NLLISDLK	MockWholeBrain	—	100.0	None	—
E9Q969	Cpeb2	FGPLVVDWPHK	Cerebellum	—	100.0	None	—
E9Q969	Cpeb2	KPFSGNVIAPPK	BrainStem	—	100.0	None	—
E9Q969	Cpeb2	KPFSGNVIAPPK	Cerebrum	—	100.0	None	—
E9Q969	Cpeb2	NSYNHHQPLLK	BrainStem	—	100.0	None	—
E9Q969	Cpeb2	NSYNHHQPLLK	Cerebellum	—	100.0	None	—
E9Q9B7	Kidins220	DGETPLIK	MockWholeBrain	—	100.0	None	—
E9Q9B7	Kidins220	ETSQVILRPGPSPNPTAVQNENLK	MockWholeBrain	—	100.0	None	—
E9Q9B7	Kidins220	GPFIAIFASDPHIIIK	MockWholeBrain	—	100.0	None	—
E9Q9B7	Kidins220	NIEVVELLLDK	MockWholeBrain	—	100.0	None	—
E9Q9B7	Kidins220	SSERPSLFQTDLK	MockWholeBrain	—	100.0	None	—
E9Q9C0	Ablim1	NSPLPYRPDSRPLTPTYAQAPK	Cerebrum	—	100.0	None	—
E9Q9C0	Ablim1	PLTPTYAQAPK	Cerebrum	—	100.0	None	—
E9Q9C3	Afdn	EELSSGDSLSPDPWK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	EPEIITVTLK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	ESSEDSFLSAIINYTNSSTVHFK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	EYFTFPASK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	GILVFQLK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	HKPGAVQETTFELGGDVHSGTALPASR	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	IYADSLKPNIPYK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	LFSQGQDVSDK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	LQFGTSHVFK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	LTELENELNTK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	LTELENELNTK	Cerebrum	—	100.0	None	—
E9Q9C3	Afdn	QQLGHIEAWAEK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	RPPDYIPK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	SQDADLPGSSGAPENLTFK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	SVTPASTLTK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	TILLSTTDTADFAVAESLEK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	TQVLSPDSLFTAK	Cerebellum	—	100.0	None	—
E9Q9C3	Afdn	TSSVVTLEVAK	BrainStem	—	100.0	None	—
E9Q9C3	Afdn	VSSTATTQDVIETLAEK	BrainStem	—	100.0	None	—

SysQuan Mouse Database

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