SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
A2AJL3	Fggy	AGHFFDLPDFLSWK	BrainStem	—	100.0	MRM	—
A2AJL3	Fggy	AGHFFDLPDFLSWK	Cerebrum	—	100.0	MRM	—
A2AN08	Ubr4	VQLTPGQTEVK	Cerebellum	—	100.0	MRM	—
A2AN08	Ubr4	VQLTPGQTEVK	MockWholeBrain	—	100.0	MRM	—
A2AN37	Uck1	PFLIGVSGGTASGK	BrainStem	—	100.0	MRM	—
A2API5	Lrp1b	LPHTAPPIYLNSDLK	Cerebrum	—	100.0	MRM	—
A2API5	Lrp1b	LPHTAPPIYLNSDLK	MockWholeBrain	—	100.0	MRM	—
A2AW73	Sema6d	TPDSVWTAVPEDK	Cerebrum	—	100.0	MRM	—
A2AWT6	Ubtf	HPELNISEEGITK	BrainStem	—	100.0	MRM	—
A2CG49	Kalrn	LQGFEGTLTAQGK	BrainStem	—	100.0	MRM	—
A6H6A9	Rabgap1l	DTGGDGQESLYK	MockWholeBrain	—	100.0	MRM	—
B0QZH4	Camta2	DTTEVAENSHHLK	Cerebrum	—	100.0	MRM	—
B0V2N1	Ptprs	SQDGPYQIK	MockWholeBrain	—	100.0	MRM	—
B1ARU4	Macf1	ELEEAVTSALQQETEK	Cerebellum	—	100.0	MRM	—
B1ARU4	Macf1	ELEEAVTSALQQETEK	Cerebrum	—	100.0	MRM	—
B1ASP2	Jak1	IGDFGLTK	BrainStem	—	100.0	MRM	—
B1ASP2	Jak1	IGDFGLTK	Cerebellum	—	100.0	MRM	—
B1ASP2	Jak1	IGDFGLTK	Cerebrum	—	100.0	MRM	—
B1ASP2	Jak1	IGDFGLTK	MockWholeBrain	—	100.0	MRM	—
B1ATS5	Atp2a3	NAESAIEALK	Cerebellum	—	100.0	MRM	—
B1AZP2	Dlgap4	ANSWQLVETPEK	BrainStem	—	100.0	MRM	—
B1AZP2	Dlgap4	ANSWQLVETPEK	Cerebellum	—	100.0	MRM	—
B1AZP2	Dlgap4	ANSWQLVETPEK	Cerebrum	—	100.0	MRM	—
B2M1R6	Hnrnpk	LLIHQSLAGGIIGVK	BrainStem	—	100.0	MRM	—
B2M1R6	Hnrnpk	LLIHQSLAGGIIGVK	Cerebellum	—	100.0	MRM	—
B2M1R6	Hnrnpk	LLIHQSLAGGIIGVK	Cerebrum	—	100.0	MRM	—
B2RQC6	Cad	FLSSAAAVSK	BrainStem	—	100.0	MRM	—
B2RQC6	Cad	FLSSAAAVSK	Cerebellum	—	100.0	MRM	—
B2RQC6	Cad	FLSSAAAVSK	Cerebrum	—	100.0	MRM	—
B2RQC6	Cad	LAADFSVPLIIDIK	BrainStem	—	100.0	MRM	—
B2RQC6	Cad	LAADFSVPLIIDIK	Cerebrum	—	100.0	MRM	—
B2RQC6	Cad	LGGAVLSFSEATSSVQK	BrainStem	—	100.0	MRM	—
B2RQC6	Cad	LGGAVLSFSEATSSVQK	Cerebellum	—	100.0	MRM	—
B2RQC6	Cad	LGGAVLSFSEATSSVQK	Cerebrum	—	100.0	MRM	—
B2RQC6	Cad	LGGAVLSFSEATSSVQK	MockWholeBrain	—	100.0	MRM	—
B2RQC6	Cad	SFPFVSK	BrainStem	—	100.0	MRM	—
B2RUK2	Erbin	NGIQEFPENIK	BrainStem	—	100.0	MRM	—
B2RX08	Sptb	LQTHADLNK	BrainStem	—	100.0	MRM	—
B2RX08	Sptb	LQTHADLNK	Cerebellum	—	100.0	MRM	—
B2RX08	Sptb	LQTHADLNK	Cerebrum	—	100.0	MRM	—
B2RX08	Sptb	LQTHADLNK	MockWholeBrain	—	100.0	MRM	—
B2RX08	Sptb	VIDHAIETEK	BrainStem	—	100.0	MRM	—
B2RX08	Sptb	VIDHAIETEK	Cerebellum	—	100.0	MRM	—
B2RX08	Sptb	VIDHAIETEK	Cerebrum	—	100.0	MRM	—
B2RX08	Sptb	VIDHAIETEK	MockWholeBrain	—	100.0	MRM	—
B2RXM2	Gm6793	EDSVKPGAHLTVK	liver	—	100.0	MRM	—
B2RXS4	Plxnb2	LFYEDGSGEK	BrainStem	—	100.0	MRM	—
B2RXS4	Plxnb2	LFYEDGSGEK	Cerebellum	—	100.0	MRM	—
B2RXS4	Plxnb2	LFYEDGSGEK	Cerebrum	—	100.0	MRM	—
B2RXS4	Plxnb2	LFYEDGSGEK	MockWholeBrain	—	100.0	MRM	—

SysQuan Mouse Database

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