SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
V9GXH3	Erc1	LSSTQQSLAEK	Cerebellum	—	100.0	0	MRM	—
V9GXM1	Arfgap1	DVTTFFSGK	Cerebellum	—	100.0	0	MRM	—
V9GXM1	Arfgap1	DVTTFFSGK	Cerebrum	—	100.0	0	MRM	—
W6PPR4	Ank3	IIEVHIEK	Cerebellum	—	100.0	0	MRM	—
A0A0G2JEU1	Aldh2	RVTLELGGK	LymphNodes	—	100.0	1	MRM	—
A0A0G2JEU1	Aldh2	RVTLELGGK	Thymus	—	100.0	1	MRM	—
A0A3Q4EBK4	Bin1	KLVDYDSAR	kidney	—	100.0	1	MRM	—
E9PV24	Fga	RLEVDIDIK	lung	—	100.0	1	MRM	—
E9Q5F4	Actb	DSYVGDEAQSKR	Cerebellum	—	100.0	1	MRM	—
O88947	F10	LKTPITFR	liver	—	100.0	1	MRM	—
O88947	F10	LKTPITFR	plasma	—	100.0	1	MRM	—
P01027	C3	GVFVLNKK	liver	—	100.0	1	MRM	—
P01027	C3	GVFVLNKK	plasma	—	100.0	1	MRM	—
P01029	C4b	KYVLPNFEVK	liver	—	100.0	1	MRM	—
P01029	C4b	KYVLPNFEVK	lung	—	100.0	1	MRM	—
P01029	C4b	KYVLPNFEVK	plasma	—	100.0	1	MRM	—
P04247	Mb	ALELFRNDIAAK	Heart	—	100.0	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	BrainStem	—	100.0	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	Cerebellum	—	100.0	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	kidney	—	100.0	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	liver	—	100.0	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	lung	—	100.0	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	LymphNodes	—	100.0	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	Muscle	—	100.0	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	Pancreas	—	100.0	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	Spleen	—	100.0	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	TailSkin	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	BoneMarrow	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	BrainStem	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	Cerebellum	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	Cerebrum	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	kidney	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	liver	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	lung	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	LymphNodes	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	Muscle	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	Pancreas	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	plasma	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	SalivaryGland	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	SmallIntestines	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	Spleen	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	Thymus	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	Thyroid	—	100.0	1	MRM	—
P24549	Aldh1a1	RVTLELGGK	BoneMarrow	—	100.0	1	MRM	—
P24549	Aldh1a1	RVTLELGGK	BrainStem	—	100.0	1	MRM	—
P24549	Aldh1a1	RVTLELGGK	Cerebrum	—	100.0	1	MRM	—
P24549	Aldh1a1	RVTLELGGK	liver	—	100.0	1	MRM	—
P24549	Aldh1a1	RVTLELGGK	plasma	—	100.0	1	MRM	—
P41216	Acsl1	TAEALDKDGWLHTGDIGK	BoneMarrow	—	100.0	1	MRM	—
P41216	Acsl1	TAEALDKDGWLHTGDIGK	BrainStem	—	100.0	1	MRM	—

SysQuan Mouse Database

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