SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
E9Q557	Dsp	GLVGIEFK	Cerebellum	—	100.0	None	—
E9Q5C9	Nolc1	AAGGAVSTPAPGK	Cerebellum	—	100.0	None	—
E9Q5C9	Nolc1	AAGGAVSTPAPGK	Cerebrum	—	100.0	None	—
E9Q5C9	Nolc1	AAGGAVSTPAPGK	MockWholeBrain	—	100.0	None	—
E9Q5C9	Nolc1	AGPYSSVPPPSVPLPK	BrainStem	—	100.0	None	—
E9Q5C9	Nolc1	AGPYSSVPPPSVPLPK	Cerebellum	—	100.0	None	—
E9Q5C9	Nolc1	AGPYSSVPPPSVPLPK	Cerebrum	—	100.0	None	—
E9Q5C9	Nolc1	DSQLSEVASK	Cerebellum	—	100.0	None	—
E9Q5C9	Nolc1	LETPNTFPK	Cerebrum	—	100.0	None	—
E9Q5C9	Nolc1	PAVTPKPSAAK	MockWholeBrain	—	100.0	None	—
E9Q5C9	Nolc1	QNETADEATTPQAK	Cerebellum	—	100.0	None	—
E9Q5C9	Nolc1	QNETADEATTPQAK	MockWholeBrain	—	100.0	None	—
E9Q5C9	Nolc1	VADNSFDAK	Cerebellum	—	100.0	None	—
E9Q5C9	Nolc1	VADNSFDAK	MockWholeBrain	—	100.0	None	—
E9Q5F9	Setd2	FLTALSNEK	Cerebellum	—	100.0	None	—
E9Q5F9	Setd2	FLTALSNEK	Cerebrum	—	100.0	None	—
E9Q5F9	Setd2	LDESPVLKPEFIGHDGR	Cerebellum	—	100.0	None	—
E9Q5F9	Setd2	QDIVSNSLEEHTVQTLK	Cerebellum	—	100.0	None	—
E9Q5F9	Setd2	QSDSPNSPAPPLQVDSNPK	BrainStem	—	100.0	None	—
E9Q5F9	Setd2	QSDSPNSPAPPLQVDSNPK	Cerebellum	—	100.0	None	—
E9Q5F9	Setd2	QSDSPNSPAPPLQVDSNPK	Cerebrum	—	100.0	None	—
E9Q5F9	Setd2	QSDSPNSPAPPLQVDSNPK	MockWholeBrain	—	100.0	None	—
E9Q5F9	Setd2	SGPEVLEVDTK	Cerebellum	—	100.0	None	—
E9Q5F9	Setd2	SGPEVLEVDTK	Cerebrum	—	100.0	None	—
E9Q5F9	Setd2	TGSPTPSNQLNDSPTFK	Cerebellum	—	100.0	None	—
E9Q5F9	Setd2	TSRPQELPVYSDDFEDLPNK	Cerebellum	—	100.0	None	—
E9Q5F9	Setd2	TSRPQELPVYSDDFEDLPNK	Cerebrum	—	100.0	None	—
E9Q5J9	Tpm3	TIDDLEDK	BrainStem	—	100.0	None	—
E9Q5J9	Tpm3	TIDDLEDK	Cerebellum	—	100.0	None	—
E9Q5J9	Tpm3	TIDDLEDK	Cerebrum	—	100.0	None	—
E9Q5K9	Ythdc1	GVWSTLPVNEK	BrainStem	—	100.0	None	—
E9Q5K9	Ythdc1	GVWSTLPVNEK	Cerebellum	—	100.0	None	—
E9Q5K9	Ythdc1	GVWSTLPVNEK	Cerebrum	—	100.0	None	—
E9Q5K9	Ythdc1	SAHLTNPWNEHKPVK	BrainStem	—	100.0	None	—
E9Q5K9	Ythdc1	SAHLTNPWNEHKPVK	Cerebellum	—	100.0	None	—
E9Q5K9	Ythdc1	SAHLTNPWNEHKPVK	Cerebrum	—	100.0	None	—
E9Q5M4	Zfr2	LGKPIPSEPTPR	Cerebrum	—	100.0	None	—
E9Q5M4	Zfr2	LGKPIPSEPTPR	MockWholeBrain	—	100.0	None	—
E9Q5X2	Cpeb2	KPFSGNVIAPPK	BrainStem	—	100.0	None	—
E9Q5X2	Cpeb2	NSYNHHQPLLK	MockWholeBrain	—	100.0	None	—
E9Q604	Itgam	FGDPLDYK	BrainStem	—	100.0	None	—
E9Q604	Itgam	FQLELPVK	BrainStem	—	100.0	None	—
E9Q604	Itgam	GFGQSVVQLGGTSVVVAAPQEAK	BrainStem	—	100.0	None	—
E9Q604	Itgam	IIGAHFSPGLQYFGQSLSGGK	BrainStem	—	100.0	None	—
E9Q604	Itgam	ILVVITDGEK	BrainStem	—	100.0	None	—
E9Q604	Itgam	KPWFVKPAESSSSSEGHGALK	BrainStem	—	100.0	None	—
E9Q604	Itgam	YVIGVGNAFNKPQSR	BrainStem	—	100.0	None	—
E9Q612	Ptpro	FSLQFEELK	Cerebrum	—	100.0	None	—
E9Q612	Ptpro	LTNPVQLDDFDSYIK	Cerebrum	—	100.0	None	—
E9Q616	Ahnak	ADIDVSGPK	Cerebellum	—	100.0	None	—

SysQuan Mouse Database

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