SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
E9Q512	Trip11	LTHSEQALSDLQLTK	BrainStem	—	100.0	None	—
E9Q512	Trip11	LTHSEQALSDLQLTK	Cerebellum	—	100.0	None	—
E9Q512	Trip11	LTHSEQALSDLQLTK	Cerebrum	—	100.0	None	—
E9Q512	Trip11	LTHSEQALSDLQLTK	MockWholeBrain	—	100.0	None	—
E9Q512	Trip11	LTQIIQQK	BrainStem	—	100.0	None	—
E9Q512	Trip11	LTQIIQQK	Cerebellum	—	100.0	None	—
E9Q512	Trip11	LTQIIQQK	Cerebrum	—	100.0	None	—
E9Q512	Trip11	LTQIIQQK	MockWholeBrain	—	100.0	None	—
E9Q512	Trip11	NLFIGHFHTPK	BrainStem	—	100.0	None	—
E9Q512	Trip11	NLFIGHFHTPK	Cerebellum	—	100.0	None	—
E9Q512	Trip11	NLFIGHFHTPK	Cerebrum	—	100.0	None	—
E9Q512	Trip11	NLFIGHFHTPK	MockWholeBrain	—	100.0	None	—
E9Q512	Trip11	NQLEESVAGNK	BrainStem	—	100.0	None	—
E9Q512	Trip11	NQLEESVAGNK	Cerebellum	—	100.0	None	—
E9Q512	Trip11	QDSQTENSDIFQETK	BrainStem	—	100.0	None	—
E9Q512	Trip11	QDSQTENSDIFQETK	Cerebellum	—	100.0	None	—
E9Q512	Trip11	QDSQTENSDIFQETK	Cerebrum	—	100.0	None	—
E9Q512	Trip11	QDSQTENSDIFQETK	MockWholeBrain	—	100.0	None	—
E9Q512	Trip11	QEVLQNLLK	BrainStem	—	100.0	None	—
E9Q512	Trip11	QEVLQNLLK	Cerebellum	—	100.0	None	—
E9Q512	Trip11	QEVLQNLLK	MockWholeBrain	—	100.0	None	—
E9Q512	Trip11	QLTQLINEK	BrainStem	—	100.0	None	—
E9Q512	Trip11	QLTQLINEK	Cerebrum	—	100.0	None	—
E9Q512	Trip11	QLTQLINEK	MockWholeBrain	—	100.0	None	—
E9Q512	Trip11	SLNQDISLAEDNQK	BrainStem	—	100.0	None	—
E9Q512	Trip11	SLNQDISLAEDNQK	Cerebellum	—	100.0	None	—
E9Q512	Trip11	SQDLDDHQHELSALQNAHQQK	BrainStem	—	100.0	None	—
E9Q512	Trip11	SQDLDDHQHELSALQNAHQQK	Cerebellum	—	100.0	None	—
E9Q512	Trip11	SQDLDDHQHELSALQNAHQQK	Cerebrum	—	100.0	None	—
E9Q512	Trip11	SQDLDDHQHELSALQNAHQQK	MockWholeBrain	—	100.0	None	—
E9Q512	Trip11	SVPNTPLRPNQQSVFNSSFSELFVK	BrainStem	—	100.0	None	—
E9Q512	Trip11	SVPNTPLRPNQQSVFNSSFSELFVK	Cerebrum	—	100.0	None	—
E9Q512	Trip11	VIDIISAK	Cerebellum	—	100.0	None	—
E9Q512	Trip11	VQSLSIEHGSEK	BrainStem	—	100.0	None	—
E9Q512	Trip11	VQSLSIEHGSEK	Cerebellum	—	100.0	None	—
E9Q512	Trip11	VQSLSIEHGSEK	Cerebrum	—	100.0	None	—
E9Q512	Trip11	VQSLSIEHGSEK	MockWholeBrain	—	100.0	None	—
E9Q555	Rnf213	GLPLDGGPALSAFK	BrainStem	—	100.0	None	—
E9Q555	Rnf213	GLPLDGGPALSAFK	Cerebellum	—	100.0	None	—
E9Q555	Rnf213	GLPLDGGPALSAFK	Cerebrum	—	100.0	None	—
E9Q555	Rnf213	GLPLDGGPALSAFK	MockWholeBrain	—	100.0	None	—
E9Q555	Rnf213	ILTIHPQVLSSLSQAAEK	Cerebrum	—	100.0	None	—
E9Q555	Rnf213	ILTIHPQVLSSLSQAAEK	MockWholeBrain	—	100.0	None	—
E9Q555	Rnf213	LTEPHLDENQVLSALLPFLK	BrainStem	—	100.0	None	—
E9Q555	Rnf213	NDNTLVVSSTPEGK	BrainStem	—	100.0	None	—
E9Q555	Rnf213	SLVDNTLPLLK	BrainStem	—	100.0	None	—
E9Q555	Rnf213	SLVDNTLPLLK	Cerebellum	—	100.0	None	—
E9Q555	Rnf213	TDAQSNLAPSDLAEVK	BrainStem	—	100.0	None	—
E9Q555	Rnf213	TDAQSNLAPSDLAEVK	Cerebellum	—	100.0	None	—
E9Q555	Rnf213	TDAQSNLAPSDLAEVK	MockWholeBrain	—	100.0	None	—

SysQuan Mouse Database

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