SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9DCL8	Ppp1r2	LHYNEGLNIK	BrainStem	—	100.0	MRM	—
Q9DCL8	Ppp1r2	LHYNEGLNIK	Cerebellum	—	100.0	MRM	—
Q9DCL8	Ppp1r2	LHYNEGLNIK	Cerebrum	—	100.0	MRM	—
Q9DCL8	Ppp1r2	LHYNEGLNIK	kidney	—	100.0	MRM	—
Q9DCL8	Ppp1r2	LHYNEGLNIK	liver	—	100.0	MRM	—
Q9DCL8	Ppp1r2	LHYNEGLNIK	lung	—	100.0	MRM	—
Q9DCL9	Paics	IATGSFLK	BrainStem	—	100.0	MRM	—
Q9DCL9	Paics	IATGSFLK	Cerebellum	—	100.0	MRM	—
Q9DCL9	Paics	IATGSFLK	Heart	—	100.0	MRM	—
Q9DCL9	Paics	IATGSFLK	kidney	—	100.0	MRM	—
Q9DCL9	Paics	IATGSFLK	lung	—	100.0	MRM	—
Q9DCL9	Paics	IATGSFLK	Muscle	—	100.0	MRM	—
Q9DCM0	Ethe1	TLYHSVHEK	BrainStem	—	100.0	MRM	—
Q9DCM0	Ethe1	TLYHSVHEK	Cerebellum	—	100.0	MRM	—
Q9DCM0	Ethe1	TLYHSVHEK	Cerebrum	—	100.0	MRM	—
Q9DCM0	Ethe1	TLYHSVHEK	Heart	—	100.0	MRM	—
Q9DCM0	Ethe1	TLYHSVHEK	kidney	—	100.0	MRM	—
Q9DCM0	Ethe1	TLYHSVHEK	liver	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	BoneMarrow	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	BrainStem	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	Cerebellum	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	Heart	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	kidney	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	liver	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	lung	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	LymphNodes	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	SalivaryGland	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	Spleen	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	Thymus	—	100.0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	BrainStem	—	100.0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	Cerebellum	—	100.0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	Muscle	—	100.0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	Pancreas	—	100.0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	SalivaryGland	—	100.0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	SmallIntestines	—	100.0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	Thymus	—	100.0	MRM	—
Q9DD02	Hikeshi	LVQTAAQQVAEDK	BrainStem	—	100.0	MRM	—
Q9DD02	Hikeshi	LVQTAAQQVAEDK	Cerebellum	—	100.0	MRM	—
Q9DD02	Hikeshi	LVQTAAQQVAEDK	Cerebrum	—	100.0	MRM	—
Q9DD02	Hikeshi	LVQTAAQQVAEDK	Heart	—	100.0	MRM	—
Q9DD02	Hikeshi	LVQTAAQQVAEDK	kidney	—	100.0	MRM	—
Q9DD02	Hikeshi	LVQTAAQQVAEDK	liver	—	100.0	MRM	—
Q9DD02	Hikeshi	LVQTAAQQVAEDK	lung	—	100.0	MRM	—
Q9EP89	Lactb	LVNTPYVDNSYK	lung	—	100.0	MRM	—
Q9EP89	Lactb	LVNTPYVDNSYK	SmallIntestines	—	100.0	MRM	—
Q9EPJ9	Arfgap1	DVTTFFSGK	Cerebrum	—	100.0	MRM	—
Q9EPJ9	Arfgap1	DVTTFFSGK	liver	—	100.0	MRM	—
Q9EPJ9	Arfgap1	DVTTFFSGK	SmallIntestines	—	100.0	MRM	—
Q9EPL8	Ipo7	ETENDDLTNVIQK	Cerebellum	—	100.0	MRM	—
Q9EPL8	Ipo7	ETENDDLTNVIQK	Cerebrum	—	100.0	MRM	—

SysQuan Mouse Database

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