SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9DC33	Hmg20a	SVFDIPIFTEEFLNHSK	SalivaryGland	—	100.0	MRM	—
Q9DC33	Hmg20a	SVFDIPIFTEEFLNHSK	Thymus	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	BoneMarrow	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	BrainStem	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	Cerebellum	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	Cerebrum	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	kidney	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	liver	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	lung	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	LymphNodes	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	SmallIntestines	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	Spleen	—	100.0	MRM	—
Q9DC48	Cdc40	LNIWDWK	Thymus	—	100.0	MRM	—
Q9DC61	Pmpca	YLSGIAHFLEK	BrainStem	—	100.0	MRM	—
Q9DC61	Pmpca	YLSGIAHFLEK	Cerebellum	—	100.0	MRM	—
Q9DC61	Pmpca	YLSGIAHFLEK	liver	—	100.0	MRM	—
Q9DC61	Pmpca	YLSGIAHFLEK	lung	—	100.0	MRM	—
Q9DC61	Pmpca	YLSGIAHFLEK	LymphNodes	—	100.0	MRM	—
Q9DC61	Pmpca	YLSGIAHFLEK	Muscle	—	100.0	MRM	—
Q9DC61	Pmpca	YLSGIAHFLEK	Pancreas	—	100.0	MRM	—
Q9DC61	Pmpca	YLSGIAHFLEK	SalivaryGland	—	100.0	MRM	—
Q9DC61	Pmpca	YLSGIAHFLEK	SmallIntestines	—	100.0	MRM	—
Q9DC61	Pmpca	YLSGIAHFLEK	Spermatozoa	—	100.0	MRM	—
Q9DCB8	Isca2	VVVDSDSLAFVK	Cerebellum	—	100.0	MRM	—
Q9DCB8	Isca2	VVVDSDSLAFVK	Cerebrum	—	100.0	MRM	—
Q9DCB8	Isca2	VVVDSDSLAFVK	kidney	—	100.0	MRM	—
Q9DCB8	Isca2	VVVDSDSLAFVK	liver	—	100.0	MRM	—
Q9DCB8	Isca2	VVVDSDSLAFVK	lung	—	100.0	MRM	—
Q9DCC4	Pycr3	IAAQTLLGTAK	Cerebellum	—	100.0	MRM	—
Q9DCC4	Pycr3	IAAQTLLGTAK	kidney	—	100.0	MRM	—
Q9DCC4	Pycr3	IAAQTLLGTAK	lung	—	100.0	MRM	—
Q9DCC4	Pycr3	IAAQTLLGTAK	Pancreas	—	100.0	MRM	—
Q9DCC4	Pycr3	IAAQTLLGTAK	SalivaryGland	—	100.0	MRM	—
Q9DCC4	Pycr3	IAAQTLLGTAK	SmallIntestines	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	BrainStem	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	Cerebellum	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	Cerebrum	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	Heart	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	kidney	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	liver	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	lung	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	Pancreas	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	plasma	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	SalivaryGland	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	TailSkin	—	100.0	MRM	—
Q9DCD0	Pgd	VDDFLANEAK	Cerebrum	—	100.0	MRM	—
Q9DCD0	Pgd	VDDFLANEAK	plasma	—	100.0	MRM	—
Q9DCD0	Pgd	VDDFLANEAK	TailSkin	—	100.0	MRM	—
Q9DCD0	Pgd	VDDFLANEAK	Thyroid	—	100.0	MRM	—
Q9DCD6	Gabarap	VPVIVEK	liver	—	100.0	MRM	—

SysQuan Mouse Database

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