SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9D6Y9	Gbe1	IYESHVGISSHEGK	Pancreas	—	100.0	MRM	—
Q9D6Y9	Gbe1	IYESHVGISSHEGK	SalivaryGland	—	100.0	MRM	—
Q9D6Y9	Gbe1	IYESHVGISSHEGK	SmallIntestines	—	100.0	MRM	—
Q9D6Y9	Gbe1	IYESHVGISSHEGK	Thymus	—	100.0	MRM	—
Q9D6Y9	Gbe1	IYESHVGISSHEGK	Thyroid	—	100.0	MRM	—
Q9D6Z1	Nop56	YPASTVQILGAEK	Heart	—	100.0	MRM	—
Q9D6Z1	Nop56	YPASTVQILGAEK	SmallIntestines	—	100.0	MRM	—
Q9D6Z1	Nop56	YPASTVQILGAEK	TailSkin	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Cerebellum	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Cerebrum	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	kidney	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	lung	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	LymphNodes	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Muscle	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Pancreas	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	SalivaryGland	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	SmallIntestines	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Spleen	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Thymus	—	100.0	MRM	—
Q9D7G0	Prps1	LNVDFALIHK	BrainStem	—	100.0	MRM	—
Q9D7G0	Prps1	LNVDFALIHK	Cerebellum	—	100.0	MRM	—
Q9D7G0	Prps1	LNVDFALIHK	Cerebrum	—	100.0	MRM	—
Q9D7G0	Prps1	LNVDFALIHK	Muscle	—	100.0	MRM	—
Q9D7G0	Prps1	LNVDFALIHK	plasma	—	100.0	MRM	—
Q9D7G0	Prps1	LNVDFALIHK	SmallIntestines	—	100.0	MRM	—
Q9D7G0	Prps1	LNVDFALIHK	Spleen	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	BrainStem	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	Cerebellum	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	Cerebrum	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	Heart	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	kidney	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	liver	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	lung	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	LymphNodes	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	Muscle	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	Pancreas	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	plasma	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	SalivaryGland	—	100.0	MRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	Thyroid	—	100.0	MRM	—
Q9D7M8	Polr2d	AGDVEEDASQLIFPK	BrainStem	—	100.0	MRM	—
Q9D7M8	Polr2d	AGDVEEDASQLIFPK	Cerebellum	—	100.0	MRM	—
Q9D7M8	Polr2d	AGDVEEDASQLIFPK	Heart	—	100.0	MRM	—
Q9D7M8	Polr2d	AGDVEEDASQLIFPK	kidney	—	100.0	MRM	—
Q9D7M8	Polr2d	AGDVEEDASQLIFPK	liver	—	100.0	MRM	—
Q9D7M8	Polr2d	AGDVEEDASQLIFPK	lung	—	100.0	MRM	—
Q9D819	Ppa1	YVANLFPYK	BrainStem	—	100.0	MRM	—
Q9D819	Ppa1	YVANLFPYK	Cerebellum	—	100.0	MRM	—
Q9D819	Ppa1	YVANLFPYK	Cerebrum	—	100.0	MRM	—
Q9D819	Ppa1	YVANLFPYK	liver	—	100.0	MRM	—
Q9D819	Ppa1	YVANLFPYK	LymphNodes	—	100.0	MRM	—

SysQuan Mouse Database

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