SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
E9PZJ8	Ascc3	SVGDVALSQIVK	Cerebellum	—	100.0	None	—
E9PZJ8	Ascc3	SVGDVALSQIVK	Cerebrum	—	100.0	None	—
E9PZJ8	Ascc3	YNTIETFNELFDAHK	Cerebrum	—	100.0	None	—
E9PZM4	Chd2	ENEVSTSATDELLSQFK	BrainStem	—	100.0	None	—
E9PZM4	Chd2	ENEVSTSATDELLSQFK	Cerebellum	—	100.0	None	—
E9PZM4	Chd2	ENEVSTSATDELLSQFK	Cerebrum	—	100.0	None	—
E9PZM4	Chd2	ENEVSTSATDELLSQFK	MockWholeBrain	—	100.0	None	—
E9PZM4	Chd2	FGAEDLFK	Cerebellum	—	100.0	None	—
E9PZM7	Scaf11	TPLSGSDSFK	Cerebellum	—	100.0	None	—
E9PZM7	Scaf11	VETVAQPAESLVDK	Cerebellum	—	100.0	None	—
E9PZM7	Scaf11	VETVAQPAESLVDK	MockWholeBrain	—	100.0	None	—
E9PZP8	Herc1	EPTLVTVLQGK	BrainStem	—	100.0	None	—
E9PZP8	Herc1	EPTLVTVLQGK	Cerebellum	—	100.0	None	—
E9PZP8	Herc1	EPTLVTVLQGK	MockWholeBrain	—	100.0	None	—
E9PZP8	Herc1	ESLSSDEQDHYLDALLSSQLALAK	BrainStem	—	100.0	None	—
E9PZP8	Herc1	FVLAALLK	BrainStem	—	100.0	None	—
E9PZP8	Herc1	FVLAALLK	Cerebellum	—	100.0	None	—
E9PZP8	Herc1	FVLAALLK	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	FVLAALLK	MockWholeBrain	—	100.0	None	—
E9PZP8	Herc1	GDIEQKPESESILDVR	BrainStem	—	100.0	None	—
E9PZP8	Herc1	GDIEQKPESESILDVR	Cerebellum	—	100.0	None	—
E9PZP8	Herc1	GDIEQKPESESILDVR	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	GDIEQKPESESILDVR	MockWholeBrain	—	100.0	None	—
E9PZP8	Herc1	HATLLGVVK	BrainStem	—	100.0	None	—
E9PZP8	Herc1	HATLLGVVK	Cerebellum	—	100.0	None	—
E9PZP8	Herc1	HATLLGVVK	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	HATLLGVVK	MockWholeBrain	—	100.0	None	—
E9PZP8	Herc1	KPLDLHLAPLVWK	Cerebellum	—	100.0	None	—
E9PZP8	Herc1	KPLDLHLAPLVWK	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	LGLGDSNNQSTLK	BrainStem	—	100.0	None	—
E9PZP8	Herc1	LGLGDSNNQSTLK	Cerebellum	—	100.0	None	—
E9PZP8	Herc1	LGLGDSNNQSTLK	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	LGLGDSNNQSTLK	MockWholeBrain	—	100.0	None	—
E9PZP8	Herc1	LIQGPLQGK	BrainStem	—	100.0	None	—
E9PZP8	Herc1	LIQGPLQGK	Cerebellum	—	100.0	None	—
E9PZP8	Herc1	LIQGPLQGK	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	LIQGPLQGK	MockWholeBrain	—	100.0	None	—
E9PZP8	Herc1	LLQILAITTGTYADK	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	LVTSPNFVVTQALVALLADK	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	LVVHGLLEDQFGGK	BrainStem	—	100.0	None	—
E9PZP8	Herc1	LVVHGLLEDQFGGK	Cerebellum	—	100.0	None	—
E9PZP8	Herc1	LVVHGLLEDQFGGK	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	LVVHGLLEDQFGGK	MockWholeBrain	—	100.0	None	—
E9PZP8	Herc1	NLGFYTDQAFGELEK	BrainStem	—	100.0	None	—
E9PZP8	Herc1	NLGFYTDQAFGELEK	Cerebellum	—	100.0	None	—
E9PZP8	Herc1	NLGFYTDQAFGELEK	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	NLGFYTDQAFGELEK	MockWholeBrain	—	100.0	None	—
E9PZP8	Herc1	SENEIASFSLEPTLPGVESQHQITEGK	BrainStem	—	100.0	None	—
E9PZP8	Herc1	SENEIASFSLEPTLPGVESQHQITEGK	Cerebrum	—	100.0	None	—
E9PZP8	Herc1	TGVSQLSTALK	MockWholeBrain	—	100.0	None	—

SysQuan Mouse Database

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