SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
E9PZ11	Zbtb47	ASGAVPASQAADGLGAK	BrainStem	—	100.0	None	—
E9PZ11	Zbtb47	ASGAVPASQAADGLGAK	Cerebrum	—	100.0	None	—
E9PZ16	Hspg2	AELLVAEAPSKPITVTVEEQR	Cerebellum	—	100.0	None	—
E9PZ16	Hspg2	FLVHDAFWALPK	Cerebellum	—	100.0	None	—
E9PZ16	Hspg2	LDVEFKPLEPNGILLFSGGK	Cerebrum	—	100.0	None	—
E9PZ16	Hspg2	LSFDQPNDFK	Cerebellum	—	100.0	None	—
E9PZ16	Hspg2	SIEYSPQLEDASAK	Cerebellum	—	100.0	None	—
E9PZ16	Hspg2	SIEYSPQLEDASAK	Cerebrum	—	100.0	None	—
E9PZ16	Hspg2	SPVISIEPPSSTVQQGQDASFK	Cerebellum	—	100.0	None	—
E9PZ16	Hspg2	SPVISIEPPSSTVQQGQDASFK	Cerebrum	—	100.0	None	—
E9PZ19	Igsf9b	FGVPIPIFIK	BrainStem	—	100.0	None	—
E9PZ19	Igsf9b	FGVPIPIFIK	Cerebellum	—	100.0	None	—
E9PZ19	Igsf9b	FGVPIPIFIK	Cerebrum	—	100.0	None	—
E9PZ19	Igsf9b	FGVPIPIFIK	MockWholeBrain	—	100.0	None	—
E9PZ19	Igsf9b	PIVTWLK	BrainStem	—	100.0	None	—
E9PZ19	Igsf9b	PIVTWLK	Cerebellum	—	100.0	None	—
E9PZ21	Rbms1	GYGFVDFDSPAAAQK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	AAEFHPGLTEGK	BrainStem	—	100.0	None	—
E9PZ43	Map4	AAEFHPGLTEGK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	AAEFHPGLTEGK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	AAEFHPGLTEGK	MockWholeBrain	—	100.0	None	—
E9PZ43	Map4	AAVGVTGNDITTPPNK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	AKPLATTQPAK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	AKPLATTQPAK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	DVKPKPITEAK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	DVKPKPITEAK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	EEQIHFSNDSNSSGK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	EEQIHFSNDSNSSGK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	ELGIAGLYLHSK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	ELSIEKPNK	BrainStem	—	100.0	None	—
E9PZ43	Map4	ELSIEKPNK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	ELSIEKPNK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	HVPGGGNVQIQNK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	HVPGGGNVQIQNK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	LEQIPEGSHK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	LGFFEGK	BrainStem	—	100.0	None	—
E9PZ43	Map4	LGFFEGK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	LGFFEGK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	LGFFEGK	MockWholeBrain	—	100.0	None	—
E9PZ43	Map4	LSAGELASLSASQVPTALTFEEPVAK	BrainStem	—	100.0	None	—
E9PZ43	Map4	LSAGELASLSASQVPTALTFEEPVAK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	LSAGELASLSASQVPTALTFEEPVAK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	LSAGELASLSASQVPTALTFEEPVAK	MockWholeBrain	—	100.0	None	—
E9PZ43	Map4	NSSFLEQNK	BrainStem	—	100.0	None	—
E9PZ43	Map4	QPAALTAALAAEDEQLSK	BrainStem	—	100.0	None	—
E9PZ43	Map4	QPAALTAALAAEDEQLSK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	QPAALTAALAAEDEQLSK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	QPAPTTSGGLNK	Cerebellum	—	100.0	None	—
E9PZ43	Map4	QPAPTTSGGLNK	Cerebrum	—	100.0	None	—
E9PZ43	Map4	SPATTLPK	Cerebellum	—	100.0	None	—

SysQuan Mouse Database

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