SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q05909	Ptprg	DNSALDPIIHGLK	Cerebellum	—	100.0	MRM+PRM	—
Q05909	Ptprg	DNSALDPIIHGLK	MockWholeBrain	—	100.0	MRM+PRM	—
Q05909	Ptprg	DNSALDPIIHGLK	plasma	—	100.0	MRM+PRM	—
Q07968	F13b	LIENGYFHPVK	plasma	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	BrainStem	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	Cerebrum	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	kidney	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	liver	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	plasma	—	100.0	MRM+PRM	—
Q11011	Npepps	IDFVGELNDK	Cerebellum	—	100.0	MRM+PRM	—
Q11011	Npepps	IDFVGELNDK	Cerebrum	—	100.0	MRM+PRM	—
Q11011	Npepps	IDFVGELNDK	Pancreas	—	100.0	MRM+PRM	—
Q11011	Npepps	IDFVGELNDK	SmallIntestines	—	100.0	MRM+PRM	—
Q11011	Npepps	IDFVGELNDK	Spleen	—	100.0	MRM+PRM	—
Q11011	Npepps	IDFVGELNDK	TailSkin	—	100.0	MRM+PRM	—
Q14DH7	Acss3	QQDPGAALGK	kidney	—	100.0	MRM+PRM	—
Q2TBE6	Pi4k2a	IYQGSSGSYFVK	Cerebrum	—	100.0	MRM+PRM	—
Q3SXB8	Colec11	VFIGINDLEK	liver	—	100.0	MRM+PRM	—
Q3SXB8	Colec11	VFIGINDLEK	plasma	—	100.0	MRM+PRM	—
Q3TB63	Hspa8	EIAEAYLGK	BrainStem	—	100.0	MRM+PRM	—
Q3TB63	Hspa8	GTLDPVEK	liver	—	100.0	MRM+PRM	—
Q3TCI7	Ldha	SADTLWGIQK	Cerebellum	—	100.0	MRM+PRM	—
Q3TCI7	Ldha	SADTLWGIQK	liver	—	100.0	MRM+PRM	—
Q3TGJ9	Gsn	QTQVSVLPEGGETPLFK	kidney	—	100.0	MRM+PRM	—
Q3TJE3	Hk1	ASGVEGADVVK	BrainStem	—	100.0	MRM+PRM	—
Q3TJE3	Hk1	ASGVEGADVVK	Cerebellum	—	100.0	MRM+PRM	—
Q3TJE3	Hk1	ASGVEGADVVK	Cerebrum	—	100.0	MRM+PRM	—
Q3TJE3	Hk1	FLLSESGSGK	Cerebellum	—	100.0	MRM+PRM	—
Q3TKF8	Hspa5	ELEEIVQPIISK	BrainStem	—	100.0	MRM+PRM	—
Q3TLY5	Gla	DVIAINQDPLGK	liver	—	100.0	MRM+PRM	—
Q3TNL1	G6pdx	IDHYLGK	Cerebrum	—	100.0	MRM+PRM	—
Q3TQY2	Dctn4	ATSISTQLPDDPAK	liver	—	100.0	MRM+PRM	—
Q3TR40	Thbs1	LVPNPDQK	BoneMarrow	—	100.0	MRM+PRM	—
Q3TR40	Thbs1	LVPNPDQK	plasma	—	100.0	MRM+PRM	—
Q3TR40	Thbs1	LVPNPDQK	Spleen	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	EIAEAYLGK	plasma	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	EIAEAYLGK	SmallIntestines	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	GTLDPVEK	liver	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	GTLDPVEK	plasma	—	100.0	MRM+PRM	—
Q3U4S1	Snx1	ALSQLAEVEEK	BrainStem	—	100.0	MRM+PRM	—
Q3U4S1	Snx1	ALSQLAEVEEK	Cerebellum	—	100.0	MRM+PRM	—
Q3U8Y7	Psmc3	APSIIFIDELDAIGTK	BoneMarrow	—	100.0	MRM+PRM	—
Q3U8Y7	Psmc3	APSIIFIDELDAIGTK	BrainStem	—	100.0	MRM+PRM	—
Q3U8Y7	Psmc3	APSIIFIDELDAIGTK	Cerebellum	—	100.0	MRM+PRM	—
Q3U8Y7	Psmc3	APSIIFIDELDAIGTK	Cerebrum	—	100.0	MRM+PRM	—
Q3U8Y7	Psmc3	APSIIFIDELDAIGTK	kidney	—	100.0	MRM+PRM	—
Q3U8Y7	Psmc3	APSIIFIDELDAIGTK	liver	—	100.0	MRM+PRM	—
Q3U8Y7	Psmc3	APSIIFIDELDAIGTK	MockWholeBrain	—	100.0	MRM+PRM	—
Q3U8Y7	Psmc3	APSIIFIDELDAIGTK	SmallIntestines	—	100.0	MRM+PRM	—
Q3U8Y7	Psmc3	APSIIFIDELDAIGTK	TailSkin	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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