SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
D9HP81	Rims2	NDSLSSDQSESVRPPPPRPHK	Cerebrum	—	100.0	None	—
D9HP81	Rims2	SGAWFYNSGSNTLQQPDQK	BrainStem	—	100.0	None	—
D9HP81	Rims2	SGAWFYNSGSNTLQQPDQK	Cerebellum	—	100.0	None	—
D9HP81	Rims2	SGAWFYNSGSNTLQQPDQK	Cerebrum	—	100.0	None	—
E0CX23	Umad1	KPSGPEPEADGFVLLGATANEVR	BrainStem	—	100.0	None	—
E0CX23	Umad1	KPSGPEPEADGFVLLGATANEVR	Cerebellum	—	100.0	None	—
E0CX23	Umad1	KPSGPEPEADGFVLLGATANEVR	Cerebrum	—	100.0	None	—
E0CX23	Umad1	KPSGPEPEADGFVLLGATANEVR	MockWholeBrain	—	100.0	None	—
E0CX32	Ccdc85a	HPHPGSSPEVLPK	Cerebrum	—	100.0	None	—
E0CX32	Ccdc85a	HVLSGSPEHFQK	BrainStem	—	100.0	None	—
E0CX32	Ccdc85a	HVLSGSPEHFQK	Cerebellum	—	100.0	None	—
E0CX32	Ccdc85a	HVLSGSPEHFQK	Cerebrum	—	100.0	None	—
E0CX32	Ccdc85a	HVLSGSPEHFQK	MockWholeBrain	—	100.0	None	—
E0CX32	Ccdc85a	VTDEELLQWSK	BrainStem	—	100.0	None	—
E0CX32	Ccdc85a	VTDEELLQWSK	Cerebrum	—	100.0	None	—
E0CX32	Ccdc85a	VTDEELLQWSK	MockWholeBrain	—	100.0	None	—
E0CXB9	Ctnna2	AHVLAASVEQATQNFLEK	Cerebrum	—	100.0	None	—
E0CXB9	Ctnna2	QVQEAIAGISSAAQATSPTDEAK	BrainStem	—	100.0	None	—
E0CXB9	Ctnna2	QVQEAIAGISSAAQATSPTDEAK	Cerebrum	—	100.0	None	—
E0CXB9	Ctnna2	VLTEAVDDITSVDDFLSVSENHILEDVNK	BrainStem	—	100.0	None	—
E0CXB9	Ctnna2	VLTEAVDDITSVDDFLSVSENHILEDVNK	Cerebrum	—	100.0	None	—
E0CXB9	Ctnna2	VYGTAAVNSPVVSWK	BrainStem	—	100.0	None	—
E0CXB9	Ctnna2	VYGTAAVNSPVVSWK	Cerebrum	—	100.0	None	—
E0CXD4	Pcdh1	VPEEQPPNTLIGSLAADYGLPDVGHLYK	Cerebrum	—	100.0	None	—
E0CXD4	Pcdh1	VPEEQPPNTLIGSLAADYGLPDVGHLYK	MockWholeBrain	—	100.0	None	—
E0CXE7	Ctc1	VALQFTGLGGQTESASK	Cerebellum	—	100.0	None	—
E0CXJ5	Kctd18	FLGPSTSTQIK	MockWholeBrain	—	100.0	None	—
E0CXQ2	Prr35	AARPLDTPLDLSVK	Cerebellum	—	100.0	None	—
E0CY14	Tle3	IWDISQPGSK	MockWholeBrain	—	100.0	None	—
E0CYT1	Wnk2	DNGAIEFTFDLEK	BrainStem	—	100.0	None	—
E0CYT1	Wnk2	EISELQSQQK	BrainStem	—	100.0	None	—
E0CYT1	Wnk2	EISELQSQQK	Cerebellum	—	100.0	None	—
E0CYT1	Wnk2	EISELQSQQK	Cerebrum	—	100.0	None	—
E0CYT1	Wnk2	FYDFWESSAK	BrainStem	—	100.0	None	—
E0CYT1	Wnk2	FYDFWESSAK	Cerebellum	—	100.0	None	—
E0CYT1	Wnk2	FYDFWESSAK	Cerebrum	—	100.0	None	—
E0CYT1	Wnk2	FYDFWESSAK	MockWholeBrain	—	100.0	None	—
E0CYT1	Wnk2	IGDLGLATLK	Cerebellum	—	100.0	None	—
E0CYT1	Wnk2	IGDLGLATLK	Cerebrum	—	100.0	None	—
E0CYT1	Wnk2	IGDLGLATLK	MockWholeBrain	—	100.0	None	—
E0CYT1	Wnk2	IWPALQSQEPK	BrainStem	—	100.0	None	—
E0CYT1	Wnk2	IWPALQSQEPK	Cerebrum	—	100.0	None	—
E0CYT1	Wnk2	IWPALQSQEPK	MockWholeBrain	—	100.0	None	—
E0CYT1	Wnk2	QEEAPAPTQEDAGTTEAKPEPGR	BrainStem	—	100.0	None	—
E0CYT1	Wnk2	QEEAPAPTQEDAGTTEAKPEPGR	Cerebellum	—	100.0	None	—
E0CYT1	Wnk2	QEEAPAPTQEDAGTTEAKPEPGR	Cerebrum	—	100.0	None	—
E0CYT1	Wnk2	QEEAPAPTQEDAGTTEAKPEPGR	MockWholeBrain	—	100.0	None	—
E0CYT1	Wnk2	QSQANAPVYQQNVLHTGK	BrainStem	—	100.0	None	—
E0CYT1	Wnk2	QSQANAPVYQQNVLHTGK	Cerebellum	—	100.0	None	—
E0CYT1	Wnk2	QSQANAPVYQQNVLHTGK	Cerebrum	—	100.0	None	—

SysQuan Mouse Database

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