SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
D3Z5N6	Dpf2	LSFPSIKPDTDQTLK	Cerebrum	—	100.0	None	—
D3Z5U5	P2rx4	GYQETDSVVSSVTTK	BrainStem	—	100.0	None	—
D3Z649	Kcnt2	LTTSESQISISVEEWEDTK	Cerebrum	—	100.0	None	—
D3Z649	Kcnt2	QELAELVK	Cerebrum	—	100.0	None	—
D3Z656	Synj1	AFQSHLK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	DSSQTLEPK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	EVIAVQGPPDGTVLVSIK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	FFWNQSLHLHLK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	IYAGTGALEGK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	LHSILKPQVQK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	NQTLTDWLLDAPK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	PTPDSQSKPSETLK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	QEAIDVLLLGNTLNSDLADK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	QLEALGLAEKPQLVTR	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	TIQNNFFDSSK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	TITITLK	MockWholeBrain	—	100.0	None	—
D3Z656	Synj1	YDLFSEDYDTSEK	MockWholeBrain	—	100.0	None	—
D3Z6F4	Dlgap1	TIQSSTGVIK	MockWholeBrain	—	100.0	None	—
D3Z6F5	Atp5f1a	FNDGTDEK	Cerebellum	—	100.0	None	—
D3Z6F5	Atp5f1a	HALIIYDDLSK	Cerebellum	—	100.0	None	—
D3Z6F5	Atp5f1a	ISEQSDAK	Cerebellum	—	100.0	None	—
D3Z6F5	Atp5f1a	ISEQSDAK	MockWholeBrain	—	100.0	None	—
D3Z6F5	Atp5f1a	TSIAIDTIINQK	Cerebellum	—	100.0	None	—
D3Z6H8	Amd2	ALVPLLK	BrainStem	—	100.0	None	—
D3Z6H8	Amd2	ALVPLLK	MockWholeBrain	—	100.0	None	—
D3Z6H8	Amd2	FVTTLFVNQSSK	Cerebrum	—	100.0	None	—
D3Z6H8	Amd2	SEWDVLLK	BrainStem	—	100.0	None	—
D3Z6H8	Amd2	SEWDVLLK	Cerebellum	—	100.0	None	—
D3Z6H8	Amd2	SEWDVLLK	Cerebrum	—	100.0	None	—
D3Z6I8	Tpm3	LATALQK	Cerebrum	—	100.0	None	—
D3Z6I8	Tpm3	LLSNELK	BrainStem	—	100.0	None	—
D3Z6Q9	Bin2	FEQSASNFYQQQAEGHK	Cerebellum	—	100.0	None	—
D3Z6X5	Nectin3	DLLGQTEHLPLQTQFK	Cerebellum	—	100.0	None	—
D3Z6X5	Nectin3	DLLGQTEHLPLQTQFK	Cerebrum	—	100.0	None	—
D3Z6X5	Nectin3	IPSLPQK	Cerebrum	—	100.0	None	—
D3Z729	Eif4e2	FQEDIISIWNK	Cerebellum	—	100.0	None	—
D3Z729	Eif4e2	QIGTFASVEQFWK	BrainStem	—	100.0	None	—
D3Z729	Eif4e2	QIGTFASVEQFWK	Cerebellum	—	100.0	None	—
D3Z729	Eif4e2	QIGTFASVEQFWK	MockWholeBrain	—	100.0	None	—
D3Z729	Eif4e2	TPGRPTSSQSYEQNIK	BrainStem	—	100.0	None	—
D3Z729	Eif4e2	TPGRPTSSQSYEQNIK	Cerebellum	—	100.0	None	—
D3Z729	Eif4e2	TPGRPTSSQSYEQNIK	MockWholeBrain	—	100.0	None	—
D3Z742	Mb21d2	LFDEGTISK	Cerebrum	—	100.0	None	—
D3Z742	Mb21d2	LQQLVTENPGK	BrainStem	—	100.0	None	—
D3Z742	Mb21d2	LQQLVTENPGK	Cerebellum	—	100.0	None	—
D3Z781	Etl4	AELEISNK	MockWholeBrain	—	100.0	None	—
D3Z781	Etl4	EAFLEHLK	MockWholeBrain	—	100.0	None	—
D3Z781	Etl4	EPGTLVYIEKPR	Cerebrum	—	100.0	None	—
D3Z781	Etl4	EPGTLVYIEKPR	MockWholeBrain	—	100.0	None	—
D3Z781	Etl4	HVTDGLLK	Cerebrum	—	100.0	None	—

SysQuan Mouse Database

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